Cow genome map
| Conread name: | Pig4-TMW8030C15 |
| Conread position: | 594-828 |
| Cow position: | chr6:77038-76812 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 594-828 |
| Cow position: | chr6:451860-451635 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 594-828 |
| Cow position: | chr6:9234914-9235141 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 594-828 |
| Cow position: | chr6:19706830-19707058 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 594-828 |
| Cow position: | chr6:21712109-21712335 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 594-828 |
| Cow position: | chr6:23879655-23879430 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 594-828 |
| Cow position: | chr6:27858861-27859085 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 595-718 |
| Cow position: | chr6:25373980-25373860 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 595-828 |
| Cow position: | chr6:42481286-42481510 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 595-828 |
| Cow position: | chr6:44598646-44598422 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 596-828 |
| Cow position: | chr6:41495431-41495209 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 596-828 |
| Cow position: | chr6:49442349-49442595 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 596-828 |
| Cow position: | chr6:57308630-57308853 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 596-828 |
| Cow position: | chr6:68030852-68031075 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 156, 16 |
| Conread position: | 598-718 |
| Cow position: | chr6:27150776-27150659 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-754 |
| Cow position: | chr6:21856967-21856820 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 598-822 |
| Cow position: | chr6:14928859-14929070 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:7137934-7137713 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:10044614-10044835 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:11020066-11020287 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:12997827-12998045 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:16049885-16049667 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:18912327-18912106 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:19712837-19712616 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:19718976-19719196 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:22737298-22737077 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:23568185-23567979 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:25374700-25374479 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:26324792-26324571 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:26771714-26771493 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:26829935-26830156 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:27173249-27173470 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:28000988-28000767 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:28184912-28184692 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:28487253-28487032 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:28701158-28700936 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:36901418-36901639 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:37217047-37217268 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:37387974-37388195 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:39912730-39912951 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:40278459-40278681 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 14 |
| Conread position: | 598-828 |
| Cow position: | chr6:46225557-46225336 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:53739698-53739920 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 97, 61 |
| Conread position: | 598-828 |
| Cow position: | chr6:61051715-61051494 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:62665183-62665404 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:63040925-63040704 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr6:67553640-67553861 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 599-755 |
| Cow position: | chr6:43187518-43187669 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-793 |
| Cow position: | chr6:47988334-47988521 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 599-810 |
| Cow position: | chr6:10681393-10681594 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-825 |
| Cow position: | chr6:3886096-3885882 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr6:13740964-13741177 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-828 |
| Cow position: | chr6:20514987-20515204 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 599-828 |
| Cow position: | chr6:32125355-32125577 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 180, 12 |
| Conread position: | 599-828 |
| Cow position: | chr6:33301077-33301298 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 162, 12 |
| Conread position: | 599-828 |
| Cow position: | chr6:55169882-55170099 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 189, 12 |
| Conread position: | 600-825 |
| Cow position: | chr6:11389206-11388988 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 600-828 |
| Cow position: | chr6:11453459-11453238 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 600-828 |
| Cow position: | chr6:55239098-55239319 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 600-828 |
| Cow position: | chr6:57521583-57521804 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 612-772 |
| Cow position: | chr6:52498131-52498283 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-825 |
| Cow position: | chr6:66234764-66234966 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 208, 47 |
| Conread position: | 612-828 |
| Cow position: | chr6:6568813-6568605 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr6:41158900-41158692 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr6:43621440-43621648 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr6:46763985-46763777 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 135, 47 |
| Conread position: | 612-828 |
| Cow position: | chr6:51717978-51718185 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 615-823 |
| Cow position: | chr6:13591734-13591936 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 622-827 |
| Cow position: | chr6:14839751-14839542 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 43 |
Show alignments to all cow chromosomes.