Cow genome map

Conread name: Pig4-TMW8036G22

Conread position: 1-187
Cow position: chr1:6164869-6165056 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 75

Conread position: 1-283
Cow position: chr1:14361565-14361281 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 111, 0

Conread position: 1-365
Cow position: chr1:11018350-11018708 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 106

Conread position: 1-388
Cow position: chr1:17436768-17436379 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 252

Conread position: 1-388
Cow position: chr1:70069571-70069974 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 1-450
Cow position: chr1:40920047-40920503 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 205

Conread position: 1-499
Cow position: chr1:34684404-34684900 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 117

Conread position: 1-527
Cow position: chr1:17033683-17033149 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 76

Conread position: 1-527
Cow position: chr1:46613386-46612851 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 268

Conread position: 1-527
Cow position: chr1:69406064-69406604 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 1-530
Cow position: chr1:20831791-20832331 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 23

Conread position: 1-530
Cow position: chr1:26812166-26811625 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr1:3383408-3382869 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 1-531
Cow position: chr1:5504846-5505388 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr1:9261418-9261946 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 262

Conread position: 1-531
Cow position: chr1:17938842-17938304 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 23

Conread position: 1-531
Cow position: chr1:19236590-19236047 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 1-531
Cow position: chr1:21090356-21090915 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 1-531
Cow position: chr1:21377652-21377108 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 1-531
Cow position: chr1:21677715-21678240 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 16

Conread position: 1-531
Cow position: chr1:26587857-26588400 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 284

Conread position: 1-531
Cow position: chr1:28713945-28714489 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 425

Conread position: 1-531
Cow position: chr1:28812336-28811792 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 179

Conread position: 1-531
Cow position: chr1:28875998-28876547 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 153

Conread position: 1-531
Cow position: chr1:30078852-30079391 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 23

Conread position: 1-531
Cow position: chr1:32961594-32961053 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 171

Conread position: 1-531
Cow position: chr1:33548493-33547951 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 259

Conread position: 1-531
Cow position: chr1:35598898-35598361 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 111

Conread position: 1-531
Cow position: chr1:38711619-38712162 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 35

Conread position: 1-531
Cow position: chr1:40681824-40681281 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 35

Conread position: 1-531
Cow position: chr1:48249621-48250167 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 426

Conread position: 1-531
Cow position: chr1:54932834-54933378 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr1:55274131-55273592 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 86

Conread position: 1-531
Cow position: chr1:57659525-57660050 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 333

Conread position: 1-531
Cow position: chr1:59483957-59483413 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 130

Conread position: 1-531
Cow position: chr1:60251520-60250976 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr1:61096404-61096950 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 427

Conread position: 1-531
Cow position: chr1:61203290-61203834 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 180

Conread position: 1-531
Cow position: chr1:61332056-61331513 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 424

Conread position: 1-531
Cow position: chr1:61340414-61339870 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr1:61342805-61342256 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr1:62927375-62927919 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr1:63045791-63046335 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 425

Conread position: 1-531
Cow position: chr1:63048485-63049028 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr1:63341563-63341022 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 23

Conread position: 1-531
Cow position: chr1:65389465-65390007 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr1:67005787-67006328 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 153

Conread position: 1-531
Cow position: chr1:69504465-69503924 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 75

Conread position: 1-531
Cow position: chr1:69769725-69770268 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr1:71559838-71559300 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 1-531
Cow position: chr1:71794439-71794983 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 425

Conread position: 1-531
Cow position: chr1:73565571-73565028 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 47

Conread position: 1-531
Cow position: chr1:76872788-76873332 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 425

Conread position: 1-531
Cow position: chr1:77747652-77748193 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 133

Conread position: 1-531
Cow position: chr1:78922104-78921563 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 23

Conread position: 1-531
Cow position: chr1:82478891-82479433 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr1:82909923-82909385 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 261

Conread position: 1-531
Cow position: chr1:82921243-82920692 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 329

Conread position: 1-531
Cow position: chr1:85794863-85795396 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 213

Conread position: 1-531
Cow position: chr1:86545230-86544688 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 27

Conread position: 1-531
Cow position: chr1:89090630-89090087 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 257

Conread position: 1-531
Cow position: chr1:89186534-89186014 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 340
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 296, 95

Conread position: 1-531
Cow position: chr1:91901925-91902469 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr1:93857429-93857972 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 256

Conread position: 1-531
Cow position: chr1:94662560-94663103 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 139

Conread position: 1-531
Cow position: chr1:99916343-99916889 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 182

Conread position: 1-532
Cow position: chr1:8556592-8557137 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-535
Cow position: chr1:11324420-11324943 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 167

Conread position: 1-535
Cow position: chr1:13579844-13579324 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 358
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 38

Conread position: 1-535
Cow position: chr1:20867697-20867155 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 85

Conread position: 1-535
Cow position: chr1:22529892-22529357 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 1-535
Cow position: chr1:40510351-40509804 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 131

Conread position: 1-535
Cow position: chr1:52864364-52863835 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 19

Conread position: 1-535
Cow position: chr1:56631295-56631832 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 213

Conread position: 1-535
Cow position: chr1:56745790-56746338 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 118

Conread position: 1-535
Cow position: chr1:61748537-61747998 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 75

Conread position: 1-535
Cow position: chr1:70388409-70387873 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 232

Conread position: 1-535
Cow position: chr1:72804603-72804065 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 401

Conread position: 1-535
Cow position: chr1:73384377-73384912 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 84

Conread position: 1-535
Cow position: chr1:86705057-86705591 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 381

Conread position: 1-535
Cow position: chr1:92553852-92553330 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 185

Conread position: 1-537
Cow position: chr1:8528513-8527959 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 167

Conread position: 1-537
Cow position: chr1:24654744-24655286 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 44

Conread position: 1-537
Cow position: chr1:51875895-51875365 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 109

Conread position: 1-541
Cow position: chr1:11199725-11199171 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 459

Conread position: 1-542
Cow position: chr1:33854188-33854727 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 207

Conread position: 1-542
Cow position: chr1:88178764-88179319 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 553

Conread position: 1-545
Cow position: chr1:61747251-61746718 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 74

Conread position: 1-550
Cow position: chr1:77866478-77867026 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 1-557
Cow position: chr1:24562827-24562279 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 375
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 190, 44

Conread position: 1-581
Cow position: chr1:98657043-98656454 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 1-644
Cow position: chr1:57970684-57970027 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 105

Conread position: 1-767
Cow position: chr1:22481754-22480949 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-782
Cow position: chr1:10006070-10005263 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 23

Conread position: 1-783
Cow position: chr1:25088767-25087945 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 595

Conread position: 1-789
Cow position: chr1:13438030-13438837 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 23

Conread position: 1-859
Cow position: chr1:59248840-59247983 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 71

Conread position: 1-866
Cow position: chr1:16574002-16573125 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 179

Conread position: 1-867
Cow position: chr1:23098561-23099447 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 20

Conread position: 1-867
Cow position: chr1:54116161-54117047 (view UCSC Genome Browser custom track)
Alignm length: 908
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 20

Conread position: 1-867
Cow position: chr1:68846795-68845895 (view UCSC Genome Browser custom track)
Alignm length: 914
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 133

Conread position: 1-867
Cow position: chr1:72086502-72087404 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 614

Conread position: 1-867
Cow position: chr1:88389241-88390125 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 58

Conread position: 4-527
Cow position: chr1:29037451-29037986 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 306

Conread position: 4-535
Cow position: chr1:14562297-14561762 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 141

Conread position: 4-535
Cow position: chr1:99864827-99865371 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 33

Conread position: 5-280
Cow position: chr1:67289320-67289597 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 42, 239

Conread position: 5-343
Cow position: chr1:63045239-63044898 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 5-360
Cow position: chr1:66504640-66504993 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 229
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 164

Conread position: 5-531
Cow position: chr1:84446591-84447132 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 60

Conread position: 5-542
Cow position: chr1:56424821-56425370 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 309

Conread position: 8-531
Cow position: chr1:18087342-18087879 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 418

Conread position: 8-531
Cow position: chr1:76618560-76618025 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 235

Conread position: 8-531
Cow position: chr1:85630249-85630786 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 418

Conread position: 8-531
Cow position: chr1:89111746-89112271 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 19

Conread position: 9-538
Cow position: chr1:44963562-44963031 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 69

Conread position: 10-534
Cow position: chr1:31415308-31414774 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 332

Conread position: 10-537
Cow position: chr1:55144960-55145501 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 10-593
Cow position: chr1:14529541-14528942 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 35

Conread position: 12-531
Cow position: chr1:69671706-69671171 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 416

Conread position: 12-534
Cow position: chr1:21114501-21113970 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 15

Conread position: 15-535
Cow position: chr1:73762609-73762091 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 61

Conread position: 18-535
Cow position: chr1:68818979-68818455 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 209

Conread position: 23-535
Cow position: chr1:100536091-100536602 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 85

Conread position: 26-313
Cow position: chr1:83108678-83108389 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 26-809
Cow position: chr1:4276574-4277406 (view UCSC Genome Browser custom track)
Alignm length: 840
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 140

Conread position: 30-531
Cow position: chr1:75402831-75403344 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 216

Conread position: 41-535
Cow position: chr1:97285716-97285207 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 94

Conread position: 42-531
Cow position: chr1:47118904-47119407 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 384

Conread position: 47-531
Cow position: chr1:20527112-20527610 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 379

Conread position: 47-531
Cow position: chr1:20847061-20846563 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 379

Conread position: 47-531
Cow position: chr1:25053635-25053137 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 379

Conread position: 47-531
Cow position: chr1:57505743-57506241 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 379

Conread position: 47-535
Cow position: chr1:95474936-95474448 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 65

Conread position: 57-531
Cow position: chr1:8603007-8602526 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 60-531
Cow position: chr1:28520616-28521101 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 366

Conread position: 60-535
Cow position: chr1:73443884-73443406 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 309

Conread position: 61-867
Cow position: chr1:98788824-98789671 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 12

Conread position: 63-531
Cow position: chr1:47455009-47454530 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 63-531
Cow position: chr1:57120852-57120388 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 51

Conread position: 63-535
Cow position: chr1:3339629-3340122 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 282

Conread position: 63-535
Cow position: chr1:11854984-11854496 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 73

Conread position: 63-537
Cow position: chr1:57574612-57574131 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 49

Conread position: 63-644
Cow position: chr1:71017378-71016771 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 391
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 57, 28

Conread position: 68-535
Cow position: chr1:58418655-58419125 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 42

Conread position: 74-464
Cow position: chr1:18137452-18137055 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 39, 64

Conread position: 78-531
Cow position: chr1:31534835-31535302 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 79-703
Cow position: chr1:79589844-79590469 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 81-839
Cow position: chr1:43568521-43567758 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 128

Conread position: 82-535
Cow position: chr1:38279752-38279282 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 91

Conread position: 89-531
Cow position: chr1:19776097-19775641 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 337

Conread position: 90-535
Cow position: chr1:72139207-72139649 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 127

Conread position: 90-540
Cow position: chr1:73403784-73404238 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 90-547
Cow position: chr1:45021231-45021692 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 44

Conread position: 93-531
Cow position: chr1:68145973-68145521 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 333

Conread position: 94-766
Cow position: chr1:101787934-101787240 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 96-583
Cow position: chr1:3012788-3012300 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 317
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 81

Conread position: 97-531
Cow position: chr1:51883617-51884059 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 296

Conread position: 98-789
Cow position: chr1:42056622-42057326 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 107

Conread position: 99-553
Cow position: chr1:86613316-86613778 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 192

Conread position: 99-867
Cow position: chr1:7324077-7324858 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 325

Conread position: 102-531
Cow position: chr1:7405680-7406121 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 322

Conread position: 102-535
Cow position: chr1:30034639-30035068 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 56

Conread position: 103-537
Cow position: chr1:21353309-21352864 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 417

Conread position: 104-535
Cow position: chr1:30883642-30883203 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 233

Conread position: 107-535
Cow position: chr1:71791936-71792383 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 112-846
Cow position: chr1:53519685-53520446 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 65

Conread position: 112-867
Cow position: chr1:58218125-58218917 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 28

Conread position: 114-531
Cow position: chr1:26537165-26536736 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 310

Conread position: 114-531
Cow position: chr1:80565056-80564627 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 310

Conread position: 114-531
Cow position: chr1:98354374-98353945 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 310

Conread position: 117-531
Cow position: chr1:83169465-83169892 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 308

Conread position: 119-531
Cow position: chr1:58192776-58192356 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 102

Conread position: 121-531
Cow position: chr1:52355645-52355222 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 126-531
Cow position: chr1:57758948-57759363 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 296

Conread position: 128-463
Cow position: chr1:57645255-57645584 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 126, 191

Conread position: 133-477
Cow position: chr1:9513327-9512976 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 59

Conread position: 133-535
Cow position: chr1:74536663-74536254 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 133-867
Cow position: chr1:53649693-53650467 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 7

Conread position: 138-867
Cow position: chr1:88027874-88028633 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 28

Conread position: 140-535
Cow position: chr1:24580446-24580860 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 266
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 156, 38

Conread position: 142-531
Cow position: chr1:13718782-13718387 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 20

Conread position: 145-535
Cow position: chr1:58440241-58439845 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 62

Conread position: 159-535
Cow position: chr1:19146101-19145713 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 167

Conread position: 160-537
Cow position: chr1:71920139-71920524 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 24

Conread position: 162-535
Cow position: chr1:43024461-43024860 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 281
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 120, 96

Conread position: 162-561
Cow position: chr1:20797895-20798300 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 164-535
Cow position: chr1:2764185-2764570 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 178

Conread position: 167-531
Cow position: chr1:17009648-17009282 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 130, 59

Conread position: 171-705
Cow position: chr1:12468712-12468143 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 269

Conread position: 172-531
Cow position: chr1:54472335-54471964 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 252

Conread position: 172-531
Cow position: chr1:89793032-89793403 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 252

Conread position: 173-540
Cow position: chr1:70038161-70037788 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 251

Conread position: 179-531
Cow position: chr1:8517984-8517620 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 245

Conread position: 189-867
Cow position: chr1:66685419-66684745 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 119

Conread position: 192-535
Cow position: chr1:53578154-53578510 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 93

Conread position: 193-531
Cow position: chr1:73967612-73967962 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 231

Conread position: 193-531
Cow position: chr1:77554897-77554553 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 60

Conread position: 193-542
Cow position: chr1:76860922-76860567 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 13, 179

Conread position: 195-531
Cow position: chr1:99118586-99118934 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 229

Conread position: 199-535
Cow position: chr1:12872347-12872001 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 30

Conread position: 202-531
Cow position: chr1:47079071-47078730 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 222

Conread position: 206-533
Cow position: chr1:6165100-6165428 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 91, 54

Conread position: 207-535
Cow position: chr1:28282901-28283234 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 90, 68

Conread position: 208-531
Cow position: chr1:56666215-56666550 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 216

Conread position: 214-531
Cow position: chr1:89234911-89234582 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 210

Conread position: 217-531
Cow position: chr1:7162684-7162358 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 207

Conread position: 217-535
Cow position: chr1:35246447-35246777 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 96

Conread position: 219-531
Cow position: chr1:98989282-98988977 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 201, 7

Conread position: 220-535
Cow position: chr1:49133046-49132719 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 226-531
Cow position: chr1:99675203-99674886 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 71, 198

Conread position: 228-537
Cow position: chr1:32912645-32912958 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 31, 19

Conread position: 229-532
Cow position: chr1:70535329-70535013 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 229-561
Cow position: chr1:72864089-72864425 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 68, 21

Conread position: 230-531
Cow position: chr1:90393617-90393307 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 67, 11

Conread position: 231-535
Cow position: chr1:33987689-33987369 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 231-593
Cow position: chr1:6241135-6240755 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 248

Conread position: 234-531
Cow position: chr1:102814614-102814923 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 63, 190

Conread position: 234-534
Cow position: chr1:82091037-82091347 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 67, 43

Conread position: 236-535
Cow position: chr1:55328083-55327783 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 132, 5

Conread position: 237-867
Cow position: chr1:53487623-53488283 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 134

Conread position: 238-531
Cow position: chr1:23861564-23861259 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 59, 186

Conread position: 239-556
Cow position: chr1:57946090-57946404 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 91

Conread position: 241-531
Cow position: chr1:4336913-4337216 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 18

Conread position: 241-544
Cow position: chr1:78074036-78073720 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 83

Conread position: 246-535
Cow position: chr1:31342243-31341954 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 38

Conread position: 246-867
Cow position: chr1:70064269-70064908 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 39

Conread position: 247-696
Cow position: chr1:58528426-58528917 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 249-545
Cow position: chr1:39480328-39480027 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 119

Conread position: 253-586
Cow position: chr1:84284254-84283909 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 171

Conread position: 257-531
Cow position: chr1:76749228-76748942 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 260-531
Cow position: chr1:73440133-73440416 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 164

Conread position: 263-535
Cow position: chr1:88328309-88328033 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 193, 0

Conread position: 266-531
Cow position: chr1:2989658-2989933 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 21

Conread position: 268-867
Cow position: chr1:54163903-54163281 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 35

Conread position: 272-531
Cow position: chr1:100591595-100591323 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 149

Conread position: 275-539
Cow position: chr1:101853918-101853647 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 162

Conread position: 278-541
Cow position: chr1:21258414-21258142 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 87

Conread position: 280-531
Cow position: chr1:92921047-92920786 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 110, 7

Conread position: 286-531
Cow position: chr1:25178831-25178575 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 27

Conread position: 286-535
Cow position: chr1:99582264-99582002 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 286-572
Cow position: chr1:57855802-57855503 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 14, 219

Conread position: 286-866
Cow position: chr1:68812720-68812124 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 45

Conread position: 288-767
Cow position: chr1:51984270-51984750 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 311
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 53

Conread position: 292-531
Cow position: chr1:73010183-73010434 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 132

Conread position: 292-583
Cow position: chr1:89263406-89263096 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 34

Conread position: 293-531
Cow position: chr1:3931140-3930890 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 294-531
Cow position: chr1:93850503-93850751 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 96, 129

Conread position: 295-535
Cow position: chr1:52434225-52434480 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 132

Conread position: 295-582
Cow position: chr1:85400893-85400604 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 99

Conread position: 296-531
Cow position: chr1:39235299-39235053 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 94, 127

Conread position: 296-531
Cow position: chr1:52371176-52371422 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 87, 82

Conread position: 296-531
Cow position: chr1:52379497-52379743 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 87, 82

Conread position: 296-531
Cow position: chr1:55159179-55158933 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 296-535
Cow position: chr1:70864463-70864700 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 71

Conread position: 296-867
Cow position: chr1:32624488-32625059 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 347
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 74, 141

Conread position: 297-535
Cow position: chr1:29656391-29656643 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 203

Conread position: 298-582
Cow position: chr1:2205226-2204951 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 160, 72

Conread position: 303-656
Cow position: chr1:44127630-44127246 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 54

Conread position: 304-866
Cow position: chr1:76304426-76303841 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 28

Conread position: 305-531
Cow position: chr1:12375091-12374854 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 118

Conread position: 305-531
Cow position: chr1:95456565-95456802 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 118

Conread position: 308-537
Cow position: chr1:17188024-17187784 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 115

Conread position: 310-531
Cow position: chr1:86496507-86496739 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 113

Conread position: 311-531
Cow position: chr1:79453541-79453310 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 314-535
Cow position: chr1:71939496-71939273 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 10

Conread position: 317-534
Cow position: chr1:64717667-64717439 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 0

Conread position: 325-531
Cow position: chr1:81308594-81308811 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 98

Conread position: 325-740
Cow position: chr1:93112114-93111674 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 416

Conread position: 421-867
Cow position: chr1:77589156-77589603 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 425-867
Cow position: chr1:32795541-32796000 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 304
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 31, 232

Conread position: 437-867
Cow position: chr1:30786174-30785723 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 165

Conread position: 537-866
Cow position: chr1:56232117-56232454 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 215
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 283

Show alignments to all cow chromosomes.