Cow genome map

Conread name: Pig4-TMW8036G22

Conread position: 1-183
Cow position: chr19:158893-158709 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-205
Cow position: chr19:5110374-5110169 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 145

Conread position: 1-327
Cow position: chr19:40834313-40833984 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 137

Conread position: 1-368
Cow position: chr19:15871679-15871305 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-451
Cow position: chr19:47189491-47189028 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 26

Conread position: 1-504
Cow position: chr19:175427-175944 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr19:41294-41836 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 35

Conread position: 1-531
Cow position: chr19:165169-164631 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 130

Conread position: 1-531
Cow position: chr19:776473-777015 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr19:1293309-1293853 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 312

Conread position: 1-531
Cow position: chr19:5732460-5732998 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 86

Conread position: 1-531
Cow position: chr19:10613187-10613731 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr19:19388793-19389337 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr19:20611293-20611837 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr19:22512204-22512747 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr19:24734102-24734640 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr19:29393301-29393845 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr19:33527806-33528350 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr19:33944526-33945069 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 179

Conread position: 1-531
Cow position: chr19:39182579-39182037 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 1-531
Cow position: chr19:43148541-43149084 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 95

Conread position: 1-531
Cow position: chr19:55164694-55164154 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr19:55377854-55378396 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 423

Conread position: 1-531
Cow position: chr19:55842959-55843501 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 473

Conread position: 1-532
Cow position: chr19:28596336-28596880 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 61

Conread position: 1-534
Cow position: chr19:743741-743210 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 67

Conread position: 1-535
Cow position: chr19:9705227-9704685 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 20

Conread position: 1-535
Cow position: chr19:36188680-36189205 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 182

Conread position: 1-542
Cow position: chr19:5044713-5044184 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 22

Conread position: 1-582
Cow position: chr19:2261475-2260880 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 170

Conread position: 1-583
Cow position: chr19:42581344-42580756 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 1-865
Cow position: chr19:35981731-35982625 (view UCSC Genome Browser custom track)
Alignm length: 911
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 77

Conread position: 1-867
Cow position: chr19:7480976-7480088 (view UCSC Genome Browser custom track)
Alignm length: 891
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 370

Conread position: 1-867
Cow position: chr19:28369495-28370381 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 20

Conread position: 1-867
Cow position: chr19:34985062-34985949 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 208

Conread position: 4-535
Cow position: chr19:1151636-1152161 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 216

Conread position: 4-793
Cow position: chr19:33594522-33593706 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 26

Conread position: 5-867
Cow position: chr19:33624552-33625439 (view UCSC Genome Browser custom track)
Alignm length: 910
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 8-531
Cow position: chr19:207466-208003 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 8-531
Cow position: chr19:4388549-4389083 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 8-531
Cow position: chr19:33876382-33876919 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 8-535
Cow position: chr19:7491066-7491597 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 10-531
Cow position: chr19:8207029-8206512 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 364

Conread position: 13-451
Cow position: chr19:35621494-35621947 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 13-535
Cow position: chr19:2588166-2588689 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 160

Conread position: 14-867
Cow position: chr19:39603487-39602612 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 120

Conread position: 18-531
Cow position: chr19:30037932-30037404 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 409

Conread position: 26-531
Cow position: chr19:2270317-2269798 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 42-535
Cow position: chr19:39943891-39943399 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 31

Conread position: 61-748
Cow position: chr19:3176485-3177212 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 68

Conread position: 63-535
Cow position: chr19:48477595-48478069 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 269

Conread position: 81-748
Cow position: chr19:14157062-14156393 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 123

Conread position: 82-531
Cow position: chr19:405189-405651 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 126

Conread position: 91-535
Cow position: chr19:47099911-47100367 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 119

Conread position: 93-867
Cow position: chr19:55421095-55421901 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 99

Conread position: 119-531
Cow position: chr19:48626138-48626562 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 305

Conread position: 133-674
Cow position: chr19:20403376-20403957 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 141-531
Cow position: chr19:31781672-31782073 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 227

Conread position: 141-531
Cow position: chr19:41205125-41204724 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 43

Conread position: 144-537
Cow position: chr19:42866578-42866974 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 171

Conread position: 159-531
Cow position: chr19:27082289-27081912 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 133

Conread position: 165-537
Cow position: chr19:28516696-28516320 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 77

Conread position: 167-535
Cow position: chr19:55216932-55217313 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 7

Conread position: 174-531
Cow position: chr19:9117944-9118313 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 250

Conread position: 181-537
Cow position: chr19:32208550-32208894 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 11

Conread position: 182-535
Cow position: chr19:32140142-32140504 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 126

Conread position: 183-694
Cow position: chr19:402391-402922 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 33

Conread position: 193-561
Cow position: chr19:20672427-20672062 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 109, 19

Conread position: 200-859
Cow position: chr19:52466126-52465425 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 134

Conread position: 216-531
Cow position: chr19:929997-930322 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 96

Conread position: 217-463
Cow position: chr19:42648208-42647955 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 80, 125

Conread position: 226-527
Cow position: chr19:5027006-5026693 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 198

Conread position: 233-531
Cow position: chr19:22391410-22391720 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 191

Conread position: 237-535
Cow position: chr19:12209737-12209423 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 60, 0

Conread position: 244-585
Cow position: chr19:2019554-2019197 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 71

Conread position: 253-530
Cow position: chr19:12652083-12652377 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 257-537
Cow position: chr19:50561283-50561572 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 122

Conread position: 259-535
Cow position: chr19:52834221-52834504 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 111, 31

Conread position: 260-535
Cow position: chr19:33649096-33648817 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 56

Conread position: 272-531
Cow position: chr19:10195645-10195916 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 152

Conread position: 279-531
Cow position: chr19:14157653-14157911 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 86

Conread position: 286-531
Cow position: chr19:23488007-23488262 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 65

Conread position: 286-534
Cow position: chr19:1581663-1581403 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 160

Conread position: 296-531
Cow position: chr19:29366785-29367031 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 296-531
Cow position: chr19:29624293-29624539 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 296-807
Cow position: chr19:7064941-7065470 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 367
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 25

Conread position: 297-531
Cow position: chr19:35781134-35781379 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 125

Conread position: 298-448
Cow position: chr19:36600271-36600426 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 298-540
Cow position: chr19:46873766-46873513 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 302-502
Cow position: chr19:1663335-1663546 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 312-535
Cow position: chr19:3221379-3221618 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 117

Show alignments to all cow chromosomes.