Cow genome map

Conread name: Pig4-TMW8036G22

Conread position: 1-375
Cow position: chr2:15964272-15963895 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 1-388
Cow position: chr2:16072747-16072355 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-432
Cow position: chr2:8778569-8778991 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 21

Conread position: 1-498
Cow position: chr2:28655002-28655509 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 131

Conread position: 1-504
Cow position: chr2:58565320-58564838 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 337
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 127

Conread position: 1-505
Cow position: chr2:12200341-12199829 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 22

Conread position: 1-514
Cow position: chr2:4725376-4725894 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 1-526
Cow position: chr2:47036001-47035462 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 425

Conread position: 1-527
Cow position: chr2:49301618-49301083 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 208

Conread position: 1-527
Cow position: chr2:49629729-49630265 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 369

Conread position: 1-527
Cow position: chr2:52621179-52621718 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 242

Conread position: 1-527
Cow position: chr2:53662913-53663455 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 423

Conread position: 1-530
Cow position: chr2:4741768-4742311 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 425

Conread position: 1-531
Cow position: chr2:981391-981947 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 187

Conread position: 1-531
Cow position: chr2:1187462-1186909 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr2:2096402-2095861 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 224

Conread position: 1-531
Cow position: chr2:3668464-3669007 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 424

Conread position: 1-531
Cow position: chr2:4451643-4451103 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 23

Conread position: 1-531
Cow position: chr2:4805331-4804792 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 111

Conread position: 1-531
Cow position: chr2:4917666-4917122 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr2:5116351-5116885 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr2:7370073-7370614 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 69

Conread position: 1-531
Cow position: chr2:8121099-8121645 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 479

Conread position: 1-531
Cow position: chr2:9962667-9962123 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr2:10263004-10262461 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 130

Conread position: 1-531
Cow position: chr2:18350996-18350451 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-531
Cow position: chr2:19013761-19014299 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 60

Conread position: 1-531
Cow position: chr2:24688083-24688627 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr2:24927816-24928330 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 103

Conread position: 1-531
Cow position: chr2:25742863-25742324 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 74

Conread position: 1-531
Cow position: chr2:26905654-26906194 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 133

Conread position: 1-531
Cow position: chr2:28647221-28646679 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 32

Conread position: 1-531
Cow position: chr2:34501535-34502079 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr2:39119005-39119549 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr2:42668303-42667759 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr2:48850843-48850295 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 429

Conread position: 1-531
Cow position: chr2:49474304-49474848 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr2:50060593-50060049 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr2:50079967-50080512 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 362

Conread position: 1-531
Cow position: chr2:53542343-53542886 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 213

Conread position: 1-531
Cow position: chr2:54739888-54740417 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 224

Conread position: 1-531
Cow position: chr2:62730929-62731471 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 363

Conread position: 1-531
Cow position: chr2:70499223-70498688 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 191

Conread position: 1-531
Cow position: chr2:80162602-80162072 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 374

Conread position: 1-535
Cow position: chr2:1693316-1693859 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 26

Conread position: 1-535
Cow position: chr2:26079927-26080455 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 345
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 112, 69

Conread position: 1-535
Cow position: chr2:33081364-33080826 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 163

Conread position: 1-535
Cow position: chr2:45918366-45917821 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 315

Conread position: 1-535
Cow position: chr2:62683067-62683617 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-535
Cow position: chr2:77858733-77859271 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-582
Cow position: chr2:1828322-1827708 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 17

Conread position: 1-736
Cow position: chr2:36059042-36058273 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 49

Conread position: 1-792
Cow position: chr2:20857166-20856372 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 163

Conread position: 1-840
Cow position: chr2:46272810-46271944 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 91

Conread position: 1-850
Cow position: chr2:43878311-43879185 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 1-852
Cow position: chr2:32391015-32391867 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 20

Conread position: 1-867
Cow position: chr2:6291323-6292185 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 193

Conread position: 1-867
Cow position: chr2:12595381-12596257 (view UCSC Genome Browser custom track)
Alignm length: 902
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 109

Conread position: 1-867
Cow position: chr2:13067602-13066690 (view UCSC Genome Browser custom track)
Alignm length: 914
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 592

Conread position: 1-867
Cow position: chr2:16330599-16331507 (view UCSC Genome Browser custom track)
Alignm length: 911
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 84

Conread position: 1-867
Cow position: chr2:29031267-29032140 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 65

Conread position: 3-535
Cow position: chr2:35884067-35883518 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 8

Conread position: 3-537
Cow position: chr2:12330346-12330877 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 69

Conread position: 4-531
Cow position: chr2:37395786-37396327 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 422

Conread position: 4-531
Cow position: chr2:39676354-39675810 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 474

Conread position: 4-535
Cow position: chr2:25023504-25024061 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 370

Conread position: 4-867
Cow position: chr2:41156583-41157488 (view UCSC Genome Browser custom track)
Alignm length: 914
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 64

Conread position: 5-343
Cow position: chr2:1844664-1844327 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 32

Conread position: 5-531
Cow position: chr2:9714077-9714611 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 420

Conread position: 5-531
Cow position: chr2:57937805-57938342 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 89

Conread position: 5-531
Cow position: chr2:72940342-72939807 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 147

Conread position: 8-867
Cow position: chr2:11153572-11152672 (view UCSC Genome Browser custom track)
Alignm length: 911
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 16

Conread position: 9-525
Cow position: chr2:3622932-3623462 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 9-531
Cow position: chr2:36983065-36983599 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 54

Conread position: 9-581
Cow position: chr2:4018169-4017608 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 35

Conread position: 9-838
Cow position: chr2:20917757-20916906 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 9

Conread position: 10-531
Cow position: chr2:17808122-17807620 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 97

Conread position: 10-536
Cow position: chr2:15569669-15569135 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 100

Conread position: 10-788
Cow position: chr2:54727662-54726869 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 51

Conread position: 10-867
Cow position: chr2:46255916-46256792 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 199

Conread position: 11-724
Cow position: chr2:47620096-47619341 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 491
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 154

Conread position: 13-583
Cow position: chr2:37810115-37809526 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 205

Conread position: 14-531
Cow position: chr2:25978476-25979006 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 328

Conread position: 14-531
Cow position: chr2:59411337-59410809 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 413

Conread position: 15-527
Cow position: chr2:17266016-17265490 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 411

Conread position: 15-535
Cow position: chr2:55481797-55481275 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 139

Conread position: 15-561
Cow position: chr2:19960761-19961291 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 97

Conread position: 18-532
Cow position: chr2:4673520-4673013 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 140

Conread position: 18-537
Cow position: chr2:80875942-80875408 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 19-531
Cow position: chr2:14208418-14207904 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 285

Conread position: 25-536
Cow position: chr2:30923893-30924416 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 186

Conread position: 26-534
Cow position: chr2:4417623-4417112 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 81

Conread position: 31-531
Cow position: chr2:38486809-38487323 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 395

Conread position: 46-531
Cow position: chr2:72016263-72016762 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 380

Conread position: 46-535
Cow position: chr2:63289465-63288966 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 223

Conread position: 47-531
Cow position: chr2:28847023-28847519 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 301

Conread position: 47-535
Cow position: chr2:5997278-5997778 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 130

Conread position: 48-531
Cow position: chr2:67188386-67187898 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 172

Conread position: 63-527
Cow position: chr2:25930944-25930467 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 110

Conread position: 63-531
Cow position: chr2:4238077-4237597 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 361

Conread position: 63-535
Cow position: chr2:9688835-9688351 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 63-561
Cow position: chr2:41183490-41183996 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 67

Conread position: 63-767
Cow position: chr2:73992189-73992927 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 157

Conread position: 64-533
Cow position: chr2:41161723-41162190 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 171

Conread position: 64-867
Cow position: chr2:19213296-19212489 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 209

Conread position: 65-531
Cow position: chr2:12752809-12752332 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 125

Conread position: 72-535
Cow position: chr2:31456211-31456682 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 35

Conread position: 77-504
Cow position: chr2:35949915-35949497 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 51

Conread position: 89-531
Cow position: chr2:16718412-16717956 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 105

Conread position: 89-541
Cow position: chr2:74860454-74860911 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 52

Conread position: 95-531
Cow position: chr2:36910647-36910197 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 331

Conread position: 98-535
Cow position: chr2:42502026-42502478 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 18

Conread position: 99-531
Cow position: chr2:18521311-18520875 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 340

Conread position: 99-534
Cow position: chr2:11898890-11899335 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 299
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 10, 34

Conread position: 103-531
Cow position: chr2:74761388-74761833 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 10

Conread position: 108-867
Cow position: chr2:13727083-13726318 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 95

Conread position: 109-539
Cow position: chr2:4339871-4340313 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 114-531
Cow position: chr2:53204609-53204180 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 310

Conread position: 114-531
Cow position: chr2:63890718-63890293 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 306

Conread position: 114-535
Cow position: chr2:31265958-31265526 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 104

Conread position: 115-535
Cow position: chr2:31487890-31488325 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 32

Conread position: 116-531
Cow position: chr2:19049347-19048923 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 100

Conread position: 118-535
Cow position: chr2:432322-431898 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 280
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 100, 124

Conread position: 119-531
Cow position: chr2:6528351-6528775 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 305

Conread position: 119-535
Cow position: chr2:4935988-4935578 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 285
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 99, 60

Conread position: 119-535
Cow position: chr2:20977563-20977984 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 24

Conread position: 131-531
Cow position: chr2:58466217-58466621 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 114

Conread position: 135-535
Cow position: chr2:27075160-27075556 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 269
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 162, 8

Conread position: 137-581
Cow position: chr2:22306739-22306278 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 357

Conread position: 141-534
Cow position: chr2:1201967-1202362 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 91, 11

Conread position: 141-538
Cow position: chr2:44932458-44932065 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 74

Conread position: 143-701
Cow position: chr2:4923482-4922898 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 132

Conread position: 145-531
Cow position: chr2:26130320-26129922 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 279

Conread position: 159-535
Cow position: chr2:82895552-82895163 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 162-583
Cow position: chr2:62819913-62819469 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 186

Conread position: 168-697
Cow position: chr2:58091031-58090470 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 80

Conread position: 172-527
Cow position: chr2:2209090-2208724 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 252

Conread position: 172-527
Cow position: chr2:2212914-2212548 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 252

Conread position: 172-531
Cow position: chr2:17119501-17119131 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 40

Conread position: 172-531
Cow position: chr2:30379853-30380222 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 103

Conread position: 177-527
Cow position: chr2:57587502-57587140 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 247

Conread position: 181-531
Cow position: chr2:826357-826006 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 210

Conread position: 182-537
Cow position: chr2:30816142-30815781 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 70

Conread position: 190-531
Cow position: chr2:9700118-9700471 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 193-531
Cow position: chr2:50432047-50431701 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 231

Conread position: 199-866
Cow position: chr2:46208659-46207984 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 36

Conread position: 199-867
Cow position: chr2:19288707-19288008 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 42

Conread position: 200-867
Cow position: chr2:41953618-41954312 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 223

Conread position: 202-537
Cow position: chr2:53174933-53175277 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 42, 62

Conread position: 207-582
Cow position: chr2:49481735-49481346 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 183, 79

Conread position: 216-531
Cow position: chr2:79978461-79978144 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 85, 202

Conread position: 217-531
Cow position: chr2:105123-104797 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 229

Conread position: 217-535
Cow position: chr2:36867936-36867608 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 17

Conread position: 218-531
Cow position: chr2:31047487-31047812 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 206

Conread position: 226-531
Cow position: chr2:49827908-49827591 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 198

Conread position: 226-743
Cow position: chr2:15241532-15240995 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 198

Conread position: 227-527
Cow position: chr2:13861840-13861526 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 229-535
Cow position: chr2:31498866-31499177 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 102

Conread position: 233-532
Cow position: chr2:9910916-9911227 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 64, 191

Conread position: 233-535
Cow position: chr2:16301558-16301871 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 185

Conread position: 236-531
Cow position: chr2:29967695-29967388 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 188

Conread position: 237-531
Cow position: chr2:13603005-13603305 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 60, 12

Conread position: 239-531
Cow position: chr2:5606046-5606349 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 151, 184

Conread position: 242-531
Cow position: chr2:68422200-68422499 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 151, 181

Conread position: 248-531
Cow position: chr2:84102018-84101723 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 176

Conread position: 252-867
Cow position: chr2:38375825-38376435 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 271

Conread position: 255-531
Cow position: chr2:9956570-9956283 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 168

Conread position: 260-531
Cow position: chr2:56307166-56306883 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 260-535
Cow position: chr2:50417676-50417958 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 79

Conread position: 261-531
Cow position: chr2:2084716-2084436 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 134, 68

Conread position: 264-544
Cow position: chr2:32417953-32417671 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 245

Conread position: 268-865
Cow position: chr2:907121-907734 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 197

Conread position: 273-531
Cow position: chr2:7506904-7506637 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 276-531
Cow position: chr2:4833638-4833372 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 147

Conread position: 278-534
Cow position: chr2:27146426-27146159 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 228

Conread position: 278-867
Cow position: chr2:70709070-70708453 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 14

Conread position: 281-531
Cow position: chr2:2558639-2558379 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 152

Conread position: 285-535
Cow position: chr2:30909189-30909449 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 12, 149

Conread position: 286-535
Cow position: chr2:243655-243395 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 130

Conread position: 288-531
Cow position: chr2:36721741-36721996 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 288-535
Cow position: chr2:68489636-68489377 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 9, 132

Conread position: 288-760
Cow position: chr2:14885493-14885969 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 80

Conread position: 289-531
Cow position: chr2:74469298-74469046 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 101, 13

Conread position: 293-531
Cow position: chr2:43047072-43046823 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 130

Conread position: 293-561
Cow position: chr2:55876344-55876617 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 9

Conread position: 293-864
Cow position: chr2:11961738-11962358 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 406
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 51, 45

Conread position: 295-535
Cow position: chr2:17941351-17941099 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 295-582
Cow position: chr2:78301695-78301391 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 287

Conread position: 296-531
Cow position: chr2:38636611-38636365 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 94, 127

Conread position: 296-531
Cow position: chr2:64530991-64531237 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 94, 127

Conread position: 296-531
Cow position: chr2:67418066-67417823 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 98, 124

Conread position: 299-531
Cow position: chr2:10882139-10882382 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 124

Conread position: 302-531
Cow position: chr2:19540724-19540484 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 88, 121

Conread position: 303-535
Cow position: chr2:86348997-86349239 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 19

Conread position: 312-531
Cow position: chr2:49461136-49461366 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 78, 111

Conread position: 312-535
Cow position: chr2:79967259-79967033 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 108

Conread position: 313-534
Cow position: chr2:40772632-40772870 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 315-867
Cow position: chr2:14821885-14821334 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 67

Conread position: 316-534
Cow position: chr2:62502301-62502071 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 398-566
Cow position: chr2:33794678-33794504 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 38

Conread position: 409-820
Cow position: chr2:56076154-56076583 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 300
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 123

Conread position: 529-739
Cow position: chr2:24432593-24432810 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 530-765
Cow position: chr2:51810638-51810408 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 191, 54

Conread position: 537-867
Cow position: chr2:23015272-23014941 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Show alignments to all cow chromosomes.