Cow genome map
| Conread name: | Pig4-TMW8036G22 |
| Conread position: | 1-187 |
| Cow position: | chr23:2169189-2169375 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-270 |
| Cow position: | chr23:5871709-5871440 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-530 |
| Cow position: | chr23:37199662-37199115 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-531 |
| Cow position: | chr23:3709257-3709798 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 36 |
| Conread position: | 1-531 |
| Cow position: | chr23:5396728-5396184 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 425 |
| Conread position: | 1-531 |
| Cow position: | chr23:10679981-10679437 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 425 |
| Conread position: | 1-531 |
| Cow position: | chr23:11343349-11343893 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 129 |
| Conread position: | 1-531 |
| Cow position: | chr23:14265205-14265739 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 23 |
| Conread position: | 1-531 |
| Cow position: | chr23:15528439-15528983 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 179 |
| Conread position: | 1-531 |
| Cow position: | chr23:21773054-21772513 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 1-531 |
| Cow position: | chr23:25351213-25351756 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 424 |
| Conread position: | 1-531 |
| Cow position: | chr23:28221558-28222098 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 1-531 |
| Cow position: | chr23:28987203-28987738 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 218 |
| Conread position: | 1-531 |
| Cow position: | chr23:31605280-31605824 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 425 |
| Conread position: | 1-534 |
| Cow position: | chr23:1338620-1338094 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 1-535 |
| Cow position: | chr23:7359316-7359856 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 67 |
| Conread position: | 1-535 |
| Cow position: | chr23:9194041-9193503 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 1-537 |
| Cow position: | chr23:27401988-27402536 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 439 |
| Conread position: | 1-539 |
| Cow position: | chr23:16367782-16368316 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 1-542 |
| Cow position: | chr23:4516393-4516940 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 347 |
| Conread position: | 1-542 |
| Cow position: | chr23:4532845-4532291 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 425 |
| Conread position: | 1-798 |
| Cow position: | chr23:32008524-32007715 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 376 |
| Conread position: | 1-841 |
| Cow position: | chr23:15215981-15215109 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 379 |
| Conread position: | 1-849 |
| Cow position: | chr23:16056573-16057440 (view UCSC Genome Browser custom track) |
| Alignm length: | 893 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 1-867 |
| Cow position: | chr23:4799318-4798436 (view UCSC Genome Browser custom track) |
| Alignm length: | 897 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 107 |
| Conread position: | 1-867 |
| Cow position: | chr23:11712815-11711927 (view UCSC Genome Browser custom track) |
| Alignm length: | 890 |
| Alignm identity: | 616 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 553 |
| Conread position: | 5-829 |
| Cow position: | chr23:17877021-17876169 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 8-338 |
| Cow position: | chr23:616402-616077 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 8-531 |
| Cow position: | chr23:1958989-1959523 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 8-531 |
| Cow position: | chr23:2024225-2023688 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 8-531 |
| Cow position: | chr23:11781644-11782182 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 69 |
| Conread position: | 25-531 |
| Cow position: | chr23:2760775-2761294 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 420 |
| Conread position: | 28-533 |
| Cow position: | chr23:14840291-14839790 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 31-531 |
| Cow position: | chr23:771609-771095 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 395 |
| Conread position: | 63-531 |
| Cow position: | chr23:5440832-5441313 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 363 |
| Conread position: | 78-535 |
| Cow position: | chr23:2180917-2180448 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 199 |
| Conread position: | 81-582 |
| Cow position: | chr23:20171265-20170745 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 193 |
| Conread position: | 89-535 |
| Cow position: | chr23:2409272-2408812 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 289 |
| Conread position: | 90-561 |
| Cow position: | chr23:345514-345043 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 306 |
| Conread position: | 93-573 |
| Cow position: | chr23:7288600-7288111 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 315 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 116-541 |
| Cow position: | chr23:29624949-29625385 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 36 |
| Conread position: | 127-535 |
| Cow position: | chr23:16999427-16999840 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 62 |
| Conread position: | 140-542 |
| Cow position: | chr23:6174011-6173614 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 55 |
| Conread position: | 140-867 |
| Cow position: | chr23:29460258-29459518 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 570 |
| Conread position: | 144-867 |
| Cow position: | chr23:6442022-6441318 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 129 |
| Conread position: | 154-535 |
| Cow position: | chr23:34346881-34347275 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 270 |
| Conread position: | 166-594 |
| Cow position: | chr23:10417571-10417115 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 79 |
| Conread position: | 167-539 |
| Cow position: | chr23:8389108-8388735 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 168-828 |
| Cow position: | chr23:2532473-2531813 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 46 |
| Conread position: | 172-527 |
| Cow position: | chr23:954771-954408 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 183 |
| Conread position: | 172-531 |
| Cow position: | chr23:31772241-31771872 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 250 |
| Conread position: | 193-531 |
| Cow position: | chr23:3878096-3877747 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 193-531 |
| Cow position: | chr23:38935168-38934838 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 199 |
| Conread position: | 209-531 |
| Cow position: | chr23:41014991-41015325 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 215 |
| Conread position: | 213-531 |
| Cow position: | chr23:36028186-36027856 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 218-535 |
| Cow position: | chr23:7088520-7088842 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 219-582 |
| Cow position: | chr23:15657766-15657386 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 81, 213 |
| Conread position: | 220-535 |
| Cow position: | chr23:24487620-24487299 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 77, 9 |
| Conread position: | 222-531 |
| Cow position: | chr23:29448173-29447854 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 75, 124 |
| Conread position: | 236-531 |
| Cow position: | chr23:31833909-31833607 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 152, 174 |
| Conread position: | 243-535 |
| Cow position: | chr23:416024-416327 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 103 |
| Conread position: | 243-561 |
| Cow position: | chr23:6593828-6593509 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 237 |
| Conread position: | 260-531 |
| Cow position: | chr23:21351835-21351555 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 263-561 |
| Cow position: | chr23:17403729-17404040 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 268-531 |
| Cow position: | chr23:27312966-27313241 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 275-531 |
| Cow position: | chr23:19492977-19493245 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 286-531 |
| Cow position: | chr23:3730446-3730189 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 294-535 |
| Cow position: | chr23:1535274-1535523 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 296-535 |
| Cow position: | chr23:30243652-30243888 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 157 |
| Conread position: | 299-531 |
| Cow position: | chr23:40773483-40773724 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 90, 122 |
| Conread position: | 306-535 |
| Cow position: | chr23:20025094-20025334 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 398-535 |
| Cow position: | chr23:3489788-3489649 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 79 |
Show alignments to all cow chromosomes.