Cow genome map

Conread name: Pig4-TMW8036G22

Conread position: 1-249
Cow position: chr24:14250895-14250645 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 0

Conread position: 1-251
Cow position: chr24:25439172-25439418 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 1-311
Cow position: chr24:25465793-25465478 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 37

Conread position: 1-477
Cow position: chr24:39680460-39680929 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 1-527
Cow position: chr24:12147645-12147103 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 1-530
Cow position: chr24:3850540-3851083 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 424

Conread position: 1-531
Cow position: chr24:6412423-6412967 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr24:14147218-14146680 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 418

Conread position: 1-531
Cow position: chr24:15296060-15296604 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr24:18112402-18112944 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 221

Conread position: 1-531
Cow position: chr24:20284262-20283723 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 189

Conread position: 1-531
Cow position: chr24:29084720-29084175 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr24:29190234-29190772 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 230

Conread position: 1-531
Cow position: chr24:31068101-31067556 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 426

Conread position: 1-531
Cow position: chr24:35824256-35823716 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 241

Conread position: 1-531
Cow position: chr24:40551570-40552108 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 36

Conread position: 1-534
Cow position: chr24:6666834-6666294 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 20

Conread position: 1-535
Cow position: chr24:17368993-17368431 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 210

Conread position: 1-535
Cow position: chr24:18267546-18267000 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 430

Conread position: 1-535
Cow position: chr24:34602147-34602665 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 344
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 296, 112

Conread position: 1-537
Cow position: chr24:41005424-41005965 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 238

Conread position: 1-538
Cow position: chr24:27148055-27148599 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 242

Conread position: 1-552
Cow position: chr24:29181323-29181862 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 206

Conread position: 1-560
Cow position: chr24:31301650-31302200 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 391

Conread position: 1-840
Cow position: chr24:20367312-20368175 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 261

Conread position: 1-859
Cow position: chr24:36721390-36722251 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 164

Conread position: 1-867
Cow position: chr24:14745308-14746200 (view UCSC Genome Browser custom track)
Alignm length: 900
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 1-867
Cow position: chr24:32361900-32360998 (view UCSC Genome Browser custom track)
Alignm length: 920
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 5-534
Cow position: chr24:15934885-15935422 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 17

Conread position: 5-535
Cow position: chr24:17764650-17764111 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 460

Conread position: 5-535
Cow position: chr24:36556629-36556094 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 204

Conread position: 7-535
Cow position: chr24:16908255-16908790 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 169

Conread position: 8-531
Cow position: chr24:40467464-40466924 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 9-531
Cow position: chr24:22974760-22975296 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 28

Conread position: 9-582
Cow position: chr24:14376686-14376105 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 77

Conread position: 10-535
Cow position: chr24:43634073-43634604 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 345
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 106, 77

Conread position: 14-535
Cow position: chr24:9071883-9071354 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 18-848
Cow position: chr24:14914855-14914034 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 71

Conread position: 25-841
Cow position: chr24:19643259-19644093 (view UCSC Genome Browser custom track)
Alignm length: 840
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 108

Conread position: 25-867
Cow position: chr24:41199702-41200543 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 124

Conread position: 26-865
Cow position: chr24:31381370-31382227 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 141

Conread position: 31-531
Cow position: chr24:7597584-7597070 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 395

Conread position: 40-535
Cow position: chr24:42938974-42938467 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 37

Conread position: 40-545
Cow position: chr24:15371767-15372278 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 177

Conread position: 42-531
Cow position: chr24:5863366-5862865 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 194

Conread position: 42-531
Cow position: chr24:11208621-11208118 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 384

Conread position: 47-867
Cow position: chr24:17998320-17999160 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 56-540
Cow position: chr24:32849141-32849636 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 321
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 51, 5

Conread position: 61-472
Cow position: chr24:6509140-6508736 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 73

Conread position: 80-582
Cow position: chr24:22287606-22288089 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 94

Conread position: 81-531
Cow position: chr24:40271877-40272336 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 89-531
Cow position: chr24:12090013-12090469 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 10

Conread position: 89-535
Cow position: chr24:32608340-32608804 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 99

Conread position: 90-535
Cow position: chr24:45086566-45087016 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 301
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 66

Conread position: 110-806
Cow position: chr24:7576765-7576031 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 108

Conread position: 113-867
Cow position: chr24:30893793-30893024 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 9

Conread position: 114-531
Cow position: chr24:22953622-22954051 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 310

Conread position: 114-535
Cow position: chr24:38813704-38814138 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 232

Conread position: 123-581
Cow position: chr24:31648926-31648458 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 43

Conread position: 133-531
Cow position: chr24:5928858-5929268 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 291

Conread position: 159-537
Cow position: chr24:45003531-45003910 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 248
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 182

Conread position: 167-867
Cow position: chr24:28498020-28497295 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 159

Conread position: 171-535
Cow position: chr24:27230208-27229840 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 7, 145

Conread position: 172-526
Cow position: chr24:6036063-6035697 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 177-867
Cow position: chr24:35067652-35066934 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 83

Conread position: 188-837
Cow position: chr24:16402250-16401594 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 87

Conread position: 192-527
Cow position: chr24:26412190-26412532 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 192-531
Cow position: chr24:5991045-5990698 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 154

Conread position: 193-535
Cow position: chr24:29179504-29179853 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 19

Conread position: 214-531
Cow position: chr24:30681962-30681644 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 164

Conread position: 217-531
Cow position: chr24:17161815-17161489 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 207

Conread position: 225-535
Cow position: chr24:17566023-17566337 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 72, 39

Conread position: 229-531
Cow position: chr24:20603924-20604238 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 195

Conread position: 229-531
Cow position: chr24:22047892-22047580 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 77

Conread position: 231-526
Cow position: chr24:28601848-28601546 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 57, 202

Conread position: 240-537
Cow position: chr24:33122113-33122421 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 242-582
Cow position: chr24:26847415-26847052 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 79

Conread position: 244-531
Cow position: chr24:40428504-40428205 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 180

Conread position: 253-739
Cow position: chr24:31356801-31357314 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 186

Conread position: 272-456
Cow position: chr24:21095308-21095117 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 67

Conread position: 272-531
Cow position: chr24:14250365-14250095 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 152

Conread position: 280-531
Cow position: chr24:5279438-5279701 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 285-867
Cow position: chr24:11462780-11462150 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 429

Conread position: 286-530
Cow position: chr24:40519370-40519115 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 16, 28

Conread position: 286-531
Cow position: chr24:7960284-7960027 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 138

Conread position: 286-535
Cow position: chr24:6415396-6415655 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 52

Conread position: 288-531
Cow position: chr24:36307814-36308069 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 9, 136

Conread position: 292-474
Cow position: chr24:43732523-43732715 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 47

Conread position: 295-535
Cow position: chr24:32823880-32823629 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 295-535
Cow position: chr24:40252882-40253129 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 10

Conread position: 295-683
Cow position: chr24:16474548-16474977 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 303
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 100, 193

Conread position: 296-531
Cow position: chr24:38296299-38296545 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 127

Conread position: 299-742
Cow position: chr24:40036708-40036222 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 436

Conread position: 300-531
Cow position: chr24:32853459-32853701 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 308-535
Cow position: chr24:28336802-28336568 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 312-531
Cow position: chr24:6442697-6442927 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 111

Conread position: 529-867
Cow position: chr24:6507436-6507089 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 67

Conread position: 537-722
Cow position: chr24:37205784-37205600 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 82

Show alignments to all cow chromosomes.