Cow genome map
| Conread name: | Pig4-TMW8036G22 |
| Conread position: | 1-249 |
| Cow position: | chr25:18179664-18179913 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-363 |
| Cow position: | chr25:19410185-19410563 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 104, 179 |
| Conread position: | 1-391 |
| Cow position: | chr25:18286618-18286240 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 194, 108 |
| Conread position: | 1-521 |
| Cow position: | chr25:28421055-28420527 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 1-531 |
| Cow position: | chr25:7223789-7223246 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 284 |
| Conread position: | 1-531 |
| Cow position: | chr25:11043265-11043805 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 203 |
| Conread position: | 1-531 |
| Cow position: | chr25:17586377-17585836 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 193 |
| Conread position: | 1-531 |
| Cow position: | chr25:20633409-20633946 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 293 |
| Conread position: | 1-531 |
| Cow position: | chr25:20772688-20772148 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 1-531 |
| Cow position: | chr25:24655524-24654988 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 1-531 |
| Cow position: | chr25:27019595-27019052 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 130 |
| Conread position: | 1-531 |
| Cow position: | chr25:29526219-29525681 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 293 |
| Conread position: | 1-531 |
| Cow position: | chr25:29803106-29802559 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 428 |
| Conread position: | 1-531 |
| Cow position: | chr25:32578021-32577476 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 426 |
| Conread position: | 1-531 |
| Cow position: | chr25:34503587-34503036 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-531 |
| Cow position: | chr25:34673930-34673400 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 294 |
| Conread position: | 1-534 |
| Cow position: | chr25:2594420-2594951 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 1-534 |
| Cow position: | chr25:23740600-23740053 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 1-535 |
| Cow position: | chr25:14011477-14012034 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 361 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 113, 94 |
| Conread position: | 1-535 |
| Cow position: | chr25:18071880-18072415 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 1-535 |
| Cow position: | chr25:25826097-25826640 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 1-535 |
| Cow position: | chr25:33688577-33688017 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 1-537 |
| Cow position: | chr25:41098554-41098006 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 442 |
| Conread position: | 1-665 |
| Cow position: | chr25:25480966-25480266 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 483 |
| Conread position: | 5-379 |
| Cow position: | chr25:3373996-3373615 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 88, 150 |
| Conread position: | 5-535 |
| Cow position: | chr25:9395065-9395599 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 109 |
| Conread position: | 8-531 |
| Cow position: | chr25:26781433-26780900 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 414 |
| Conread position: | 8-848 |
| Cow position: | chr25:23773592-23772741 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 125 |
| Conread position: | 10-544 |
| Cow position: | chr25:21967820-21968372 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 448 |
| Conread position: | 23-535 |
| Cow position: | chr25:10136488-10137003 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 115 |
| Conread position: | 63-537 |
| Cow position: | chr25:26930799-26931288 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 379 |
| Conread position: | 68-535 |
| Cow position: | chr25:14619294-14618823 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 311, 84 |
| Conread position: | 81-531 |
| Cow position: | chr25:17904364-17904826 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 343 |
| Conread position: | 83-867 |
| Cow position: | chr25:37468579-37469342 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 35 |
| Conread position: | 98-531 |
| Cow position: | chr25:26706142-26705696 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 327 |
| Conread position: | 98-535 |
| Cow position: | chr25:23361221-23361675 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 109 |
| Conread position: | 111-533 |
| Cow position: | chr25:37648191-37648606 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 98 |
| Conread position: | 119-531 |
| Cow position: | chr25:31073834-31073410 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 305 |
| Conread position: | 133-535 |
| Cow position: | chr25:11955607-11956021 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 136-534 |
| Cow position: | chr25:18264975-18265376 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 256 |
| Conread position: | 152-808 |
| Cow position: | chr25:24664480-24663794 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 35 |
| Conread position: | 159-531 |
| Cow position: | chr25:19139770-19139386 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 265 |
| Conread position: | 159-531 |
| Cow position: | chr25:26922644-26923024 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 166 |
| Conread position: | 165-867 |
| Cow position: | chr25:35040075-35039340 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 166 |
| Conread position: | 171-724 |
| Cow position: | chr25:12834529-12833970 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 70 |
| Conread position: | 172-810 |
| Cow position: | chr25:13786790-13787464 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 192-531 |
| Cow position: | chr25:14756574-14756225 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 229 |
| Conread position: | 196-534 |
| Cow position: | chr25:33039635-33039296 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 200-535 |
| Cow position: | chr25:15367585-15367927 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 214-535 |
| Cow position: | chr25:12082488-12082161 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 217-531 |
| Cow position: | chr25:32610550-32610234 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 173, 67 |
| Conread position: | 218-531 |
| Cow position: | chr25:6954929-6955254 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 206 |
| Conread position: | 220-537 |
| Cow position: | chr25:10013198-10012870 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 226-531 |
| Cow position: | chr25:34164688-34164376 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 226-531 |
| Cow position: | chr25:35588947-35589263 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 198 |
| Conread position: | 235-535 |
| Cow position: | chr25:37593280-37593592 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 214 |
| Conread position: | 243-531 |
| Cow position: | chr25:35372727-35372427 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 54, 181 |
| Conread position: | 249-535 |
| Cow position: | chr25:23913565-23913858 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 249-866 |
| Cow position: | chr25:27231251-27231903 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 338 |
| Conread position: | 249-867 |
| Cow position: | chr25:12756532-12755880 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 446 |
| Conread position: | 257-531 |
| Cow position: | chr25:19923427-19923707 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 45, 159 |
| Conread position: | 258-526 |
| Cow position: | chr25:18452202-18452483 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 6, 225 |
| Conread position: | 260-537 |
| Cow position: | chr25:40322385-40322098 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 130, 45 |
| Conread position: | 275-531 |
| Cow position: | chr25:39386912-39386643 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 278-531 |
| Cow position: | chr25:11124687-11124952 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 286-531 |
| Cow position: | chr25:22151034-22151291 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 286-535 |
| Cow position: | chr25:18486395-18486649 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 295-531 |
| Cow position: | chr25:26850276-26850031 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 183 |
| Conread position: | 295-765 |
| Cow position: | chr25:20075421-20075923 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 296-531 |
| Cow position: | chr25:28275726-28275482 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 300-531 |
| Cow position: | chr25:17995347-17995104 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 7 |
| Conread position: | 311-531 |
| Cow position: | chr25:29358057-29357826 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 79, 112 |
| Conread position: | 319-582 |
| Cow position: | chr25:36512248-36512525 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 76, 91 |
| Conread position: | 326-540 |
| Cow position: | chr25:28264318-28264542 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 199 |
| Conread position: | 336-535 |
| Cow position: | chr25:37966942-37967151 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 419-867 |
| Cow position: | chr25:14394021-14393553 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 419-867 |
| Cow position: | chr25:21562859-21562404 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 309 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 35, 157 |
| Conread position: | 537-789 |
| Cow position: | chr25:31954749-31954491 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 160 |
Show alignments to all cow chromosomes.