Cow genome map
| Conread name: | Pig4-TMW8036G22 |
| Conread position: | 1-363 |
| Cow position: | chr27:17422445-17422802 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 1-504 |
| Cow position: | chr27:8426714-8427228 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 1-527 |
| Cow position: | chr27:5984177-5983637 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-527 |
| Cow position: | chr27:26784675-26785210 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 1-531 |
| Cow position: | chr27:3232678-3232137 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 1-531 |
| Cow position: | chr27:10578799-10579344 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 426 |
| Conread position: | 1-531 |
| Cow position: | chr27:14297071-14297604 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 111 |
| Conread position: | 1-531 |
| Cow position: | chr27:16031544-16031000 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 425 |
| Conread position: | 1-531 |
| Cow position: | chr27:19523855-19523312 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 1-531 |
| Cow position: | chr27:25801352-25800814 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 396 |
| Conread position: | 1-535 |
| Cow position: | chr27:21451296-21451844 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 1-536 |
| Cow position: | chr27:17567956-17568497 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 1-537 |
| Cow position: | chr27:1520533-1521077 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 425 |
| Conread position: | 1-542 |
| Cow position: | chr27:166064-165511 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 75 |
| Conread position: | 1-583 |
| Cow position: | chr27:1536037-1536632 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 20 |
| Conread position: | 1-714 |
| Cow position: | chr27:31249102-31249826 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 1-738 |
| Cow position: | chr27:4982225-4982996 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 4-531 |
| Cow position: | chr27:29036513-29035985 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 244 |
| Conread position: | 8-531 |
| Cow position: | chr27:15634474-15633946 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 149 |
| Conread position: | 11-368 |
| Cow position: | chr27:8726446-8726801 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 76 |
| Conread position: | 23-535 |
| Cow position: | chr27:25873515-25874017 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 97, 237 |
| Conread position: | 24-531 |
| Cow position: | chr27:20810297-20810813 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 30-535 |
| Cow position: | chr27:25799143-25799659 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 6 |
| Conread position: | 39-713 |
| Cow position: | chr27:15405540-15406230 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 77 |
| Conread position: | 42-531 |
| Cow position: | chr27:26329827-26330329 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 138 |
| Conread position: | 42-867 |
| Cow position: | chr27:1188549-1189411 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 590 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 138 |
| Conread position: | 45-534 |
| Cow position: | chr27:27556705-27557202 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 115 |
| Conread position: | 47-531 |
| Cow position: | chr27:13353205-13353703 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 379 |
| Conread position: | 48-531 |
| Cow position: | chr27:13308544-13309041 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 378 |
| Conread position: | 63-537 |
| Cow position: | chr27:2558076-2557590 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 75-541 |
| Cow position: | chr27:12281625-12282097 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 80-531 |
| Cow position: | chr27:22797725-22797262 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 100-535 |
| Cow position: | chr27:15374775-15375204 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 105-542 |
| Cow position: | chr27:344964-344523 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 233 |
| Conread position: | 107-472 |
| Cow position: | chr27:19932601-19932228 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 45 |
| Conread position: | 115-535 |
| Cow position: | chr27:25784784-25784361 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 103, 140 |
| Conread position: | 119-531 |
| Cow position: | chr27:19424405-19423980 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 121-531 |
| Cow position: | chr27:30307293-30306872 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 146 |
| Conread position: | 133-531 |
| Cow position: | chr27:3990813-3990403 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 197 |
| Conread position: | 133-531 |
| Cow position: | chr27:11480918-11481328 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 246 |
| Conread position: | 133-535 |
| Cow position: | chr27:8290833-8291242 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 139-531 |
| Cow position: | chr27:3653706-3653303 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 53 |
| Conread position: | 141-485 |
| Cow position: | chr27:28051784-28051434 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 248, 49 |
| Conread position: | 170-867 |
| Cow position: | chr27:12262482-12261776 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 171-542 |
| Cow position: | chr27:22329521-22329901 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 172-531 |
| Cow position: | chr27:12006174-12006545 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 181-533 |
| Cow position: | chr27:6524244-6523880 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 201-535 |
| Cow position: | chr27:30782960-30783304 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 217-537 |
| Cow position: | chr27:14669268-14669593 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 80, 149 |
| Conread position: | 221-866 |
| Cow position: | chr27:17565559-17564898 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 260 |
| Conread position: | 235-867 |
| Cow position: | chr27:9263187-9262511 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 238-867 |
| Cow position: | chr27:25884923-25885566 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 54 |
| Conread position: | 242-582 |
| Cow position: | chr27:910484-910841 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 58, 136 |
| Conread position: | 244-504 |
| Cow position: | chr27:16627457-16627728 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 249-537 |
| Cow position: | chr27:14641847-14642117 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 178 |
| Conread position: | 255-533 |
| Cow position: | chr27:21392121-21392409 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 261-535 |
| Cow position: | chr27:13316678-13316960 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 36, 136 |
| Conread position: | 278-535 |
| Cow position: | chr27:10670190-10670438 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 286-531 |
| Cow position: | chr27:22647492-22647235 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 292-531 |
| Cow position: | chr27:9970317-9970568 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 5, 132 |
| Conread position: | 295-537 |
| Cow position: | chr27:30036019-30036274 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 296-531 |
| Cow position: | chr27:2331654-2331900 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 299-534 |
| Cow position: | chr27:21350004-21350247 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 340-535 |
| Cow position: | chr27:25112357-25112562 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 457-867 |
| Cow position: | chr27:12111892-12112307 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 126, 82 |
Show alignments to all cow chromosomes.