Cow genome map

Conread name: Pig4-TMW8036G22

Conread position: 1-172
Cow position: chr29:648954-649128 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 1-275
Cow position: chr29:15995512-15995236 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 108, 0

Conread position: 1-347
Cow position: chr29:34538370-34538032 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 109, 131

Conread position: 1-527
Cow position: chr29:12797457-12797992 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 41

Conread position: 1-531
Cow position: chr29:726599-727143 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 425

Conread position: 1-531
Cow position: chr29:1478323-1478865 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 36

Conread position: 1-531
Cow position: chr29:2102717-2103256 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr29:4163559-4164102 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 27

Conread position: 1-531
Cow position: chr29:7847259-7847806 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 428

Conread position: 1-531
Cow position: chr29:10452945-10452402 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 242

Conread position: 1-531
Cow position: chr29:10820845-10820301 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-531
Cow position: chr29:16036547-16036003 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 425

Conread position: 1-531
Cow position: chr29:16064581-16065124 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 423

Conread position: 1-531
Cow position: chr29:19620398-19619855 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 274

Conread position: 1-531
Cow position: chr29:19890425-19890979 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 437

Conread position: 1-531
Cow position: chr29:20254037-20254578 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 251

Conread position: 1-531
Cow position: chr29:21226847-21227389 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 196

Conread position: 1-531
Cow position: chr29:21429987-21429446 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 29

Conread position: 1-531
Cow position: chr29:22279244-22279786 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 445

Conread position: 1-531
Cow position: chr29:22745770-22746314 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr29:23979581-23980124 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 353

Conread position: 1-531
Cow position: chr29:24806326-24806869 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 84

Conread position: 1-531
Cow position: chr29:28657498-28656954 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr29:31764910-31765454 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr29:32291466-32292008 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 75

Conread position: 1-531
Cow position: chr29:32352488-32353009 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 247

Conread position: 1-531
Cow position: chr29:32515195-32515742 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 428

Conread position: 1-531
Cow position: chr29:32556874-32556330 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 425

Conread position: 1-531
Cow position: chr29:35264787-35265331 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-531
Cow position: chr29:40294202-40294721 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 102

Conread position: 1-534
Cow position: chr29:22950025-22949484 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 171

Conread position: 1-535
Cow position: chr29:15943223-15943766 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 424

Conread position: 1-537
Cow position: chr29:35274159-35273619 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 61

Conread position: 1-541
Cow position: chr29:42256108-42255554 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 1-542
Cow position: chr29:21474019-21474573 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 1-841
Cow position: chr29:579019-578183 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 21

Conread position: 1-867
Cow position: chr29:2299446-2298552 (view UCSC Genome Browser custom track)
Alignm length: 921
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 319

Conread position: 4-865
Cow position: chr29:17408002-17408885 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 73

Conread position: 5-531
Cow position: chr29:6934365-6934897 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 239

Conread position: 5-533
Cow position: chr29:13585091-13585625 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 37

Conread position: 8-531
Cow position: chr29:19515467-19514931 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 311

Conread position: 8-534
Cow position: chr29:43964676-43964143 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 121

Conread position: 8-537
Cow position: chr29:8511373-8511898 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 52

Conread position: 11-531
Cow position: chr29:3329473-3330006 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 414

Conread position: 16-582
Cow position: chr29:1577089-1576530 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 119

Conread position: 23-535
Cow position: chr29:30433301-30432777 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 414

Conread position: 32-535
Cow position: chr29:4217218-4217711 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 75

Conread position: 43-535
Cow position: chr29:17153162-17153654 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 45

Conread position: 72-536
Cow position: chr29:32800210-32800687 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 113

Conread position: 82-527
Cow position: chr29:34331478-34331018 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 89-531
Cow position: chr29:7665041-7664586 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 124

Conread position: 90-867
Cow position: chr29:24577613-24578405 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 442

Conread position: 102-535
Cow position: chr29:3169882-3169455 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 95

Conread position: 107-531
Cow position: chr29:27702055-27702491 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 317

Conread position: 114-531
Cow position: chr29:40156729-40157158 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 310

Conread position: 121-534
Cow position: chr29:11785996-11786419 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 38

Conread position: 126-535
Cow position: chr29:11365019-11365434 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 66

Conread position: 140-531
Cow position: chr29:13624363-13623960 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 284

Conread position: 162-541
Cow position: chr29:27857605-27857981 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 206

Conread position: 172-531
Cow position: chr29:15072438-15072067 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 172-560
Cow position: chr29:2307045-2307443 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 378

Conread position: 175-867
Cow position: chr29:4260223-4260918 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 57

Conread position: 177-527
Cow position: chr29:7428094-7427732 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 188-531
Cow position: chr29:40954834-40954481 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 8

Conread position: 193-550
Cow position: chr29:38409257-38409630 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 235

Conread position: 193-867
Cow position: chr29:17649820-17650507 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 41

Conread position: 196-534
Cow position: chr29:6872207-6871867 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 103, 81

Conread position: 199-527
Cow position: chr29:7701315-7700980 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 138

Conread position: 206-867
Cow position: chr29:35739613-35738952 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 54

Conread position: 208-531
Cow position: chr29:18010654-18010989 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 216

Conread position: 209-531
Cow position: chr29:38229087-38229421 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 225

Conread position: 225-747
Cow position: chr29:13129526-13128994 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 31

Conread position: 236-535
Cow position: chr29:9639423-9639111 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 209

Conread position: 238-531
Cow position: chr29:1687857-1688156 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 186

Conread position: 244-535
Cow position: chr29:4366281-4366577 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 95

Conread position: 246-525
Cow position: chr29:5961122-5961411 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 122

Conread position: 253-531
Cow position: chr29:24983443-24983157 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 171

Conread position: 258-531
Cow position: chr29:5785620-5785908 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 19

Conread position: 260-535
Cow position: chr29:32806200-32806479 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 210

Conread position: 277-534
Cow position: chr29:9939652-9939377 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 8

Conread position: 278-867
Cow position: chr29:26262771-26263406 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 413
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 361

Conread position: 280-531
Cow position: chr29:11119561-11119298 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 144

Conread position: 284-867
Cow position: chr29:133133-133736 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 22

Conread position: 286-531
Cow position: chr29:34850914-34851168 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 139

Conread position: 296-531
Cow position: chr29:32316238-32316483 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 126

Conread position: 296-533
Cow position: chr29:40116472-40116728 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 296-867
Cow position: chr29:24668900-24669493 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 86

Conread position: 305-531
Cow position: chr29:21167450-21167683 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 307-531
Cow position: chr29:16096991-16097226 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 116

Conread position: 315-535
Cow position: chr29:24951657-24951887 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 193

Conread position: 325-535
Cow position: chr29:960398-960619 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 98

Conread position: 339-846
Cow position: chr29:3106516-3107051 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 40

Show alignments to all cow chromosomes.