Cow genome map


           Conread name:
           Pig4-TMW8053B08
        

               Conread position:
               581-821
               

               Cow position:
               chr5:6197652-6197423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               184, 42
               

               Conread position:
               581-861
               

               Cow position:
               chr5:41523847-41523578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               581-870
               

               Cow position:
               chr5:6219088-6219364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               581-870
               

               Cow position:
               chr5:18491546-18491831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               586-870
               

               Cow position:
               chr5:21827968-21828250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 14
               

               Conread position:
               587-870
               

               Cow position:
               chr5:26100880-26101151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               591-870
               

               Cow position:
               chr5:4388330-4388600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               191, 59
               

               Conread position:
               651-870
               

               Cow position:
               chr5:6129629-6129844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               709-868
               

               Cow position:
               chr5:20408803-20408643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               135
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               73, 0
               
Show alignments to all cow chromosomes.