Cow genome map
| Conread name: | Pig4-TMW8055K04 |
| Conread position: | 295-662 |
| Cow position: | chr13:1442076-1442452 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 55 |
| Conread position: | 300-595 |
| Cow position: | chr13:61977685-61977982 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 300-596 |
| Cow position: | chr13:47569775-47570076 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 55, 102 |
| Conread position: | 300-622 |
| Cow position: | chr13:1882820-1882496 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 92 |
| Conread position: | 302-586 |
| Cow position: | chr13:21764043-21764334 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 73, 50 |
| Conread position: | 302-662 |
| Cow position: | chr13:4667778-4668149 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 53, 149 |
| Conread position: | 303-619 |
| Cow position: | chr13:32794647-32794329 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 52, 110 |
| Conread position: | 306-659 |
| Cow position: | chr13:57431948-57431586 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 50, 108 |
| Conread position: | 307-533 |
| Cow position: | chr13:27408835-27408604 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 307-543 |
| Cow position: | chr13:19114726-19114499 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 307-550 |
| Cow position: | chr13:40426319-40426569 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 307-622 |
| Cow position: | chr13:4944083-4944405 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 307-623 |
| Cow position: | chr13:4855779-4856098 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 307-640 |
| Cow position: | chr13:26987217-26986879 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 307-657 |
| Cow position: | chr13:14183258-14182900 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 104 |
| Conread position: | 307-659 |
| Cow position: | chr13:6441539-6441892 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 307-659 |
| Cow position: | chr13:44466482-44466123 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 43 |
| Conread position: | 307-664 |
| Cow position: | chr13:25881935-25882287 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 48, 85 |
| Conread position: | 307-665 |
| Cow position: | chr13:11301894-11302252 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 308-622 |
| Cow position: | chr13:6360561-6360881 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-664 |
| Cow position: | chr13:11169450-11169098 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 309-622 |
| Cow position: | chr13:20538851-20538528 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 8, 107 |
| Conread position: | 315-621 |
| Cow position: | chr13:49976371-49976684 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 40, 98 |
| Conread position: | 316-545 |
| Cow position: | chr13:30242924-30243160 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-619 |
| Cow position: | chr13:3014880-3015181 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 316-621 |
| Cow position: | chr13:5230264-5229951 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 39, 108 |
| Conread position: | 316-621 |
| Cow position: | chr13:13902559-13902870 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:561682-561371 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:1591452-1591141 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 316-622 |
| Cow position: | chr13:4486555-4486868 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:6665426-6665113 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:7608849-7609160 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 316-622 |
| Cow position: | chr13:11389960-11390273 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:14400375-14400061 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:16807299-16807612 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:20572009-20571694 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 316-622 |
| Cow position: | chr13:21837595-21837282 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:30305888-30306201 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:31730869-31730556 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr13:38611926-38612239 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 39, 107 |
| Conread position: | 316-622 |
| Cow position: | chr13:43975241-43974936 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 316-622 |
| Cow position: | chr13:60425736-60426042 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-637 |
| Cow position: | chr13:34039640-34039311 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 316-638 |
| Cow position: | chr13:36347420-36347095 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 240 |
| Conread position: | 316-640 |
| Cow position: | chr13:14303281-14302953 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr13:15921755-15921424 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr13:19637855-19638186 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr13:32734484-32734154 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 317-622 |
| Cow position: | chr13:3556115-3556427 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr13:53157686-53157374 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 320-620 |
| Cow position: | chr13:30469409-30469105 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 320-622 |
| Cow position: | chr13:14411465-14411156 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 320-664 |
| Cow position: | chr13:59403462-59403124 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 321-611 |
| Cow position: | chr13:19239615-19239904 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 91 |
| Conread position: | 321-622 |
| Cow position: | chr13:44324256-44323946 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 357-615 |
| Cow position: | chr13:34345052-34345312 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 51 |
| Conread position: | 362-622 |
| Cow position: | chr13:5622946-5622682 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 362-622 |
| Cow position: | chr13:52459405-52459147 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 368-659 |
| Cow position: | chr13:51441582-51441289 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 667-819 |
| Cow position: | chr13:44645593-44645436 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 88, 127 |
| Conread position: | 668-832 |
| Cow position: | chr13:18437718-18437886 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 669-831 |
| Cow position: | chr13:5717567-5717405 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 111 |
Show alignments to all cow chromosomes.