Cow genome map
| Conread name: | Pig4-TMW8055K04 |
| Conread position: | 279-607 |
| Cow position: | chr15:23173530-23173195 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 279-622 |
| Cow position: | chr15:19724313-19724657 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 298-622 |
| Cow position: | chr15:19735241-19734910 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 299-605 |
| Cow position: | chr15:20429798-20430101 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 299-662 |
| Cow position: | chr15:9736158-9735798 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 299-663 |
| Cow position: | chr15:50870020-50870385 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 300-602 |
| Cow position: | chr15:2617505-2617201 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 300-659 |
| Cow position: | chr15:15864811-15865160 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 55, 124 |
| Conread position: | 300-665 |
| Cow position: | chr15:25122375-25122002 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 114 |
| Conread position: | 304-622 |
| Cow position: | chr15:12418144-12417821 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 109 |
| Conread position: | 307-526 |
| Cow position: | chr15:3564194-3563970 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 307-620 |
| Cow position: | chr15:2021876-2021560 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 307-622 |
| Cow position: | chr15:4626850-4626530 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 65, 104 |
| Conread position: | 307-622 |
| Cow position: | chr15:12365967-12366284 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 307-622 |
| Cow position: | chr15:21367052-21366731 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 307-622 |
| Cow position: | chr15:44073014-44073336 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 307-635 |
| Cow position: | chr15:50956201-50956530 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 307-662 |
| Cow position: | chr15:23275008-23274659 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 307-664 |
| Cow position: | chr15:36670736-36671105 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 123 |
| Conread position: | 307-664 |
| Cow position: | chr15:46231064-46231421 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 40, 111 |
| Conread position: | 308-622 |
| Cow position: | chr15:2633141-2632819 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-622 |
| Cow position: | chr15:4077566-4077240 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 308-622 |
| Cow position: | chr15:23797697-23798021 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 308-622 |
| Cow position: | chr15:32491320-32491001 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-659 |
| Cow position: | chr15:53575102-53574740 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 308-664 |
| Cow position: | chr15:21966602-21966965 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 309-621 |
| Cow position: | chr15:4388315-4388635 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 311-622 |
| Cow position: | chr15:7963464-7963146 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 311-644 |
| Cow position: | chr15:49448586-49448246 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 312-647 |
| Cow position: | chr15:41964353-41964671 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 128, 41 |
| Conread position: | 316-619 |
| Cow position: | chr15:24796446-24796751 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-620 |
| Cow position: | chr15:6164515-6164206 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-621 |
| Cow position: | chr15:5983217-5983515 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 316-621 |
| Cow position: | chr15:21825441-21825753 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-621 |
| Cow position: | chr15:42532626-42532938 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr15:3008258-3007949 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 316-622 |
| Cow position: | chr15:5641015-5640702 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 316-622 |
| Cow position: | chr15:11575432-11575122 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 316-622 |
| Cow position: | chr15:13682912-13683232 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 316-622 |
| Cow position: | chr15:15344527-15344214 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr15:21663166-21662853 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr15:35750719-35750407 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr15:42939492-42939800 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-628 |
| Cow position: | chr15:32858442-32858760 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr15:4924740-4925064 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 316-640 |
| Cow position: | chr15:17035055-17034720 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 107 |
| Conread position: | 316-640 |
| Cow position: | chr15:44666635-44666304 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 316-661 |
| Cow position: | chr15:13546472-13546125 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-662 |
| Cow position: | chr15:502889-503241 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 317-622 |
| Cow position: | chr15:25069917-25069605 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr15:33305210-33304898 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 317-622 |
| Cow position: | chr15:45244171-45244488 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 317-634 |
| Cow position: | chr15:1129406-1129097 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 320-622 |
| Cow position: | chr15:6119967-6120266 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 320-622 |
| Cow position: | chr15:32646940-32647249 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 320-622 |
| Cow position: | chr15:51220321-51220631 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 320-628 |
| Cow position: | chr15:4952907-4953222 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 321-622 |
| Cow position: | chr15:20413156-20413464 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 347-664 |
| Cow position: | chr15:2670670-2670359 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 283, 7 |
| Conread position: | 360-640 |
| Cow position: | chr15:2899633-2899351 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 362-640 |
| Cow position: | chr15:5196982-5197257 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 362-640 |
| Cow position: | chr15:27747893-27747613 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 667-832 |
| Cow position: | chr15:38750253-38750421 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 20 |
Show alignments to all cow chromosomes.