Cow genome map

Conread name: Pig4-TMW8055K04

Conread position: 279-619
Cow position: chr16:45550339-45550682 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 132

Conread position: 279-622
Cow position: chr16:14440560-14440913 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 138

Conread position: 279-640
Cow position: chr16:52524489-52524853 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 61

Conread position: 279-662
Cow position: chr16:34208066-34208427 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 261
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 72

Conread position: 280-664
Cow position: chr16:11309554-11309928 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 300-622
Cow position: chr16:7674248-7673920 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 113

Conread position: 302-622
Cow position: chr16:20635000-20634673 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 157

Conread position: 302-662
Cow position: chr16:41823025-41823383 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 13

Conread position: 306-609
Cow position: chr16:23672771-23673081 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 109

Conread position: 307-564
Cow position: chr16:43744359-43744106 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 140, 40

Conread position: 307-622
Cow position: chr16:37443308-37442995 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 51

Conread position: 307-662
Cow position: chr16:10569077-10569413 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 105

Conread position: 307-664
Cow position: chr16:45816891-45816534 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 88

Conread position: 307-780
Cow position: chr16:11640147-11640642 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 326
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 107

Conread position: 308-618
Cow position: chr16:7009276-7009585 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 105

Conread position: 308-622
Cow position: chr16:20377682-20377994 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 47, 105

Conread position: 308-622
Cow position: chr16:41515352-41515673 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 105

Conread position: 308-628
Cow position: chr16:21017779-21018106 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 105

Conread position: 309-524
Cow position: chr16:37533007-37533223 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 115

Conread position: 309-619
Cow position: chr16:193715-193397 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 46, 104

Conread position: 316-544
Cow position: chr16:5487998-5488233 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 97

Conread position: 316-586
Cow position: chr16:34505928-34506205 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 97

Conread position: 316-603
Cow position: chr16:3819593-3819886 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 97

Conread position: 316-613
Cow position: chr16:25344206-25344510 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 39, 97

Conread position: 316-615
Cow position: chr16:12161051-12160746 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 86

Conread position: 316-615
Cow position: chr16:49254010-49253711 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 99

Conread position: 316-619
Cow position: chr16:14352452-14352144 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 85

Conread position: 316-620
Cow position: chr16:7466842-7467151 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 96

Conread position: 316-620
Cow position: chr16:51087011-51087322 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 99

Conread position: 316-621
Cow position: chr16:2394597-2394902 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 94

Conread position: 316-621
Cow position: chr16:4343674-4343365 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 96

Conread position: 316-621
Cow position: chr16:14662880-14662568 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chr16:417122-417436 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 98

Conread position: 316-622
Cow position: chr16:2233492-2233185 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 73

Conread position: 316-622
Cow position: chr16:2408666-2408353 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chr16:2480913-2480608 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 45

Conread position: 316-622
Cow position: chr16:2724994-2724683 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 37, 95

Conread position: 316-622
Cow position: chr16:3332140-3332448 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 65

Conread position: 316-622
Cow position: chr16:4973294-4972984 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 99

Conread position: 316-622
Cow position: chr16:13422691-13422381 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 99

Conread position: 316-622
Cow position: chr16:14100082-14100393 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 95

Conread position: 316-622
Cow position: chr16:15494686-15494999 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 40, 97

Conread position: 316-622
Cow position: chr16:15569999-15570311 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 10

Conread position: 316-622
Cow position: chr16:15980149-15979837 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 85

Conread position: 316-622
Cow position: chr16:26388937-26388624 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 94

Conread position: 316-622
Cow position: chr16:27731153-27730840 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 97

Conread position: 316-622
Cow position: chr16:31586468-31586159 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chr16:37487029-37486716 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 98

Conread position: 316-622
Cow position: chr16:40293942-40293629 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chr16:42117983-42118284 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 100

Conread position: 316-622
Cow position: chr16:46102388-46102076 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 97

Conread position: 316-628
Cow position: chr16:43895034-43894715 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 97

Conread position: 316-629
Cow position: chr16:12535710-12535401 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 96

Conread position: 316-634
Cow position: chr16:45608643-45608969 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 94

Conread position: 316-640
Cow position: chr16:3769782-3769452 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 97

Conread position: 316-640
Cow position: chr16:8813873-8813544 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 85

Conread position: 316-640
Cow position: chr16:28206883-28206552 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 97

Conread position: 316-641
Cow position: chr16:37478632-37478301 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 39, 97

Conread position: 317-556
Cow position: chr16:24621468-24621222 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 96

Conread position: 317-622
Cow position: chr16:20204230-20204545 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 203
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 98

Conread position: 317-640
Cow position: chr16:43563163-43562836 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 93

Conread position: 317-648
Cow position: chr16:15549081-15549406 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 97

Conread position: 320-614
Cow position: chr16:39615471-39615758 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 114, 34

Conread position: 320-622
Cow position: chr16:10440471-10440780 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 93

Conread position: 320-623
Cow position: chr16:25964146-25964452 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 93

Conread position: 321-606
Cow position: chr16:27105593-27105881 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 92

Conread position: 321-615
Cow position: chr16:42863338-42863049 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 29

Conread position: 323-640
Cow position: chr16:24241165-24240841 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 32, 90

Conread position: 331-640
Cow position: chr16:28468880-28468564 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 82

Conread position: 667-817
Cow position: chr16:12175422-12175269 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 135

Conread position: 668-812
Cow position: chr16:16958377-16958227 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 668-832
Cow position: chr16:15975624-15975460 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 7

Conread position: 668-832
Cow position: chr16:44704261-44704430 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Show alignments to all cow chromosomes.