Cow genome map
| Conread name: | Pig4-TMW8055K04 |
| Conread position: | 278-659 |
| Cow position: | chr17:21066918-21066532 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 116 |
| Conread position: | 279-603 |
| Cow position: | chr17:18785181-18785511 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 104 |
| Conread position: | 279-622 |
| Cow position: | chr17:2150941-2151280 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 131 |
| Conread position: | 282-602 |
| Cow position: | chr17:41918943-41919267 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 300-605 |
| Cow position: | chr17:8495979-8495690 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 300-640 |
| Cow position: | chr17:18100303-18099955 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 113 |
| Conread position: | 307-540 |
| Cow position: | chr17:10799165-10798930 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 307-582 |
| Cow position: | chr17:39913702-39913424 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 307-611 |
| Cow position: | chr17:2078436-2078733 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 133, 101 |
| Conread position: | 307-623 |
| Cow position: | chr17:1654982-1654660 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 307-649 |
| Cow position: | chr17:603139-602796 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 307-664 |
| Cow position: | chr17:19406518-19406169 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 308-619 |
| Cow position: | chr17:15853510-15853832 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-620 |
| Cow position: | chr17:15808767-15809086 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 308-622 |
| Cow position: | chr17:15438584-15438892 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 130, 39 |
| Conread position: | 308-622 |
| Cow position: | chr17:24027203-24026882 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-622 |
| Cow position: | chr17:25739084-25739397 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-622 |
| Cow position: | chr17:27791993-27791681 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 308-629 |
| Cow position: | chr17:11775452-11775134 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 316-586 |
| Cow position: | chr17:27977909-27978176 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 316-602 |
| Cow position: | chr17:14899511-14899803 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-608 |
| Cow position: | chr17:33935049-33934753 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 316-609 |
| Cow position: | chr17:22106847-22106547 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-621 |
| Cow position: | chr17:19215606-19215295 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr17:183935-184248 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr17:2838821-2839126 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-622 |
| Cow position: | chr17:6071323-6071637 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr17:6122571-6122884 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr17:24292424-24292735 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 316-622 |
| Cow position: | chr17:40810538-40810852 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-628 |
| Cow position: | chr17:22562934-22563252 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 316-640 |
| Cow position: | chr17:138401-138727 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr17:6262645-6262975 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 316-640 |
| Cow position: | chr17:13930685-13931014 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 317-568 |
| Cow position: | chr17:15719132-15719389 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-609 |
| Cow position: | chr17:18722089-18721791 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 317-622 |
| Cow position: | chr17:15709204-15708892 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr17:20390563-20390875 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr17:20545927-20546238 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 320-622 |
| Cow position: | chr17:8204728-8205047 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 320-622 |
| Cow position: | chr17:15374204-15374506 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 321-662 |
| Cow position: | chr17:4161660-4161332 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 332-622 |
| Cow position: | chr17:37529168-37528871 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 23, 81 |
Show alignments to all cow chromosomes.