Cow genome map
| Conread name: | Pig4-TMW8055K04 |
| Conread position: | 278-620 |
| Cow position: | chr18:28930431-28930099 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 160, 77 |
| Conread position: | 279-586 |
| Cow position: | chr18:41124744-41124439 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 279-649 |
| Cow position: | chr18:48529087-48529468 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 282-621 |
| Cow position: | chr18:49782301-49781956 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 128 |
| Conread position: | 300-557 |
| Cow position: | chr18:36605440-36605700 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 300-623 |
| Cow position: | chr18:54167649-54167334 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 99 |
| Conread position: | 300-652 |
| Cow position: | chr18:36114446-36114094 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 130 |
| Conread position: | 300-664 |
| Cow position: | chr18:28268919-28268559 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 56, 110 |
| Conread position: | 301-664 |
| Cow position: | chr18:29014454-29014102 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 151, 50 |
| Conread position: | 304-635 |
| Cow position: | chr18:54974925-54974591 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 307-622 |
| Cow position: | chr18:33607246-33607559 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 307-636 |
| Cow position: | chr18:23802026-23802361 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 307-663 |
| Cow position: | chr18:22681792-22682153 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 107 |
| Conread position: | 307-664 |
| Cow position: | chr18:24712976-24712617 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 308-644 |
| Cow position: | chr18:39812631-39812293 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 308-650 |
| Cow position: | chr18:41156179-41156512 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 315-695 |
| Cow position: | chr18:17092093-17092462 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 11 |
| Conread position: | 316-529 |
| Cow position: | chr18:41838101-41837881 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 40 |
| Conread position: | 316-568 |
| Cow position: | chr18:27834771-27834512 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-606 |
| Cow position: | chr18:32656582-32656879 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-609 |
| Cow position: | chr18:52655818-52656118 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-617 |
| Cow position: | chr18:54032729-54033037 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-619 |
| Cow position: | chr18:6733951-6733642 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:5535985-5536296 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 316-622 |
| Cow position: | chr18:6882244-6881931 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:14418989-14419301 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:16173601-16173289 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:25354529-25354841 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:29863593-29863280 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:32164920-32164607 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:35057037-35057350 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 316-622 |
| Cow position: | chr18:36776287-36776600 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:37508980-37509292 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr18:38158530-38158218 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 316-622 |
| Cow position: | chr18:40484007-40484324 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 316-622 |
| Cow position: | chr18:52630246-52629934 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr18:27989768-27990099 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 317-615 |
| Cow position: | chr18:33271650-33271954 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 320-634 |
| Cow position: | chr18:16472157-16471842 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 326-662 |
| Cow position: | chr18:29074913-29075255 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 88 |
| Conread position: | 358-622 |
| Cow position: | chr18:1145484-1145219 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 362-622 |
| Cow position: | chr18:23701735-23701474 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 366-755 |
| Cow position: | chr18:46874394-46874000 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 72, 332 |
| Conread position: | 667-824 |
| Cow position: | chr18:51309328-51309490 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 667-832 |
| Cow position: | chr18:36778736-36778905 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 88, 121 |
Show alignments to all cow chromosomes.