Cow genome map
| Conread name: | Pig4-TMW8055K04 |
| Conread position: | 266-664 |
| Cow position: | chr20:1534602-1534204 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 280 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 279-541 |
| Cow position: | chr20:23900305-23900571 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 140 |
| Conread position: | 304-664 |
| Cow position: | chr20:14867415-14867056 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 50, 99 |
| Conread position: | 305-613 |
| Cow position: | chr20:37955885-37955570 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 307-532 |
| Cow position: | chr20:10063007-10062776 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 307-622 |
| Cow position: | chr20:15295008-15295313 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 131, 28 |
| Conread position: | 307-659 |
| Cow position: | chr20:5794745-5795105 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 307-662 |
| Cow position: | chr20:13816597-13816955 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 307-662 |
| Cow position: | chr20:21836968-21837332 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 307-662 |
| Cow position: | chr20:30397161-30396799 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 307-663 |
| Cow position: | chr20:2016836-2016478 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 308-622 |
| Cow position: | chr20:5538154-5538465 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-622 |
| Cow position: | chr20:14721403-14721085 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 51, 105 |
| Conread position: | 308-664 |
| Cow position: | chr20:870045-869686 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 116 |
| Conread position: | 308-664 |
| Cow position: | chr20:25987736-25988086 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 311-662 |
| Cow position: | chr20:24508083-24507746 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 316-561 |
| Cow position: | chr20:11719758-11720009 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 316-573 |
| Cow position: | chr20:28294292-28294556 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-597 |
| Cow position: | chr20:9339002-9339292 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 316-619 |
| Cow position: | chr20:35127651-35127959 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 316-622 |
| Cow position: | chr20:6136009-6135698 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:7597877-7597564 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:9410344-9410657 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 316-622 |
| Cow position: | chr20:12435415-12435106 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 91 |
| Conread position: | 316-622 |
| Cow position: | chr20:13765873-13766185 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:15090395-15090079 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:16106428-16106741 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:17658252-17657939 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:23804899-23804587 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 316-622 |
| Cow position: | chr20:24568289-24567976 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:26800304-26799991 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:28560904-28560592 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:30688855-30689167 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr20:37169246-37168935 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 108 |
| Conread position: | 316-622 |
| Cow position: | chr20:39234211-39234524 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr20:12568336-12568005 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr20:22208602-22208932 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr20:23466670-23466338 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr20:25845643-25845314 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 317-551 |
| Cow position: | chr20:16189760-16189519 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-621 |
| Cow position: | chr20:18489927-18490241 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 317-621 |
| Cow position: | chr20:24542407-24542718 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr20:20092280-20092592 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr20:33597983-33597671 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-662 |
| Cow position: | chr20:38654874-38654527 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 318-622 |
| Cow position: | chr20:5076973-5077279 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 318-667 |
| Cow position: | chr20:8098773-8099124 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 320-621 |
| Cow position: | chr20:753422-753733 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 35, 226 |
| Conread position: | 320-622 |
| Cow position: | chr20:21397804-21398112 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 320-622 |
| Cow position: | chr20:28444364-28444054 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 322-622 |
| Cow position: | chr20:35159596-35159292 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 91 |
| Conread position: | 324-619 |
| Cow position: | chr20:15116797-15117101 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 366-664 |
| Cow position: | chr20:10685774-10686066 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 668-829 |
| Cow position: | chr20:3676784-3676624 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 87 |
Show alignments to all cow chromosomes.