Cow genome map
| Conread name: | Pig4-TMW8055K04 |
| Conread position: | 279-621 |
| Cow position: | chr21:33998469-33998115 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 134 |
| Conread position: | 279-664 |
| Cow position: | chr21:45790166-45790551 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 299-670 |
| Cow position: | chr21:5630928-5630570 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 300-622 |
| Cow position: | chr21:14122386-14122059 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 304-650 |
| Cow position: | chr21:26830363-26830702 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 307-619 |
| Cow position: | chr21:21918576-21918892 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 307-619 |
| Cow position: | chr21:24949196-24949509 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 307-622 |
| Cow position: | chr21:23549172-23548857 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 307-640 |
| Cow position: | chr21:13112309-13111977 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 48, 116 |
| Conread position: | 307-662 |
| Cow position: | chr21:4864264-4863909 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 307-662 |
| Cow position: | chr21:16899372-16899732 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 307-662 |
| Cow position: | chr21:20578303-20577946 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 307-662 |
| Cow position: | chr21:49647882-49647526 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 307-663 |
| Cow position: | chr21:30858049-30858407 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 307-663 |
| Cow position: | chr21:46291465-46291823 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 307-665 |
| Cow position: | chr21:78937-78585 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 307-700 |
| Cow position: | chr21:32203322-32203718 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 308-622 |
| Cow position: | chr21:42916876-42917196 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-641 |
| Cow position: | chr21:27608618-27608280 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-660 |
| Cow position: | chr21:30312790-30313145 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 144, 97 |
| Conread position: | 308-662 |
| Cow position: | chr21:12099617-12099974 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 309-624 |
| Cow position: | chr21:37323717-37323395 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 8, 102 |
| Conread position: | 316-562 |
| Cow position: | chr21:4079133-4079386 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:1195629-1195941 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:4813248-4812935 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 316-622 |
| Cow position: | chr21:5020236-5020549 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:10570377-10570690 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:10853355-10853668 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:11509031-11509344 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:13162528-13162837 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:21171235-21170922 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:27125627-27125315 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:27287072-27287382 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:28915880-28915572 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:36376080-36376393 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:36535118-36534805 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr21:39428492-39428805 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-632 |
| Cow position: | chr21:27343309-27342985 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 316-640 |
| Cow position: | chr21:149240-149568 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 95 |
| Conread position: | 316-640 |
| Cow position: | chr21:31513178-31512849 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr21:33256646-33256977 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 317-614 |
| Cow position: | chr21:30654666-30654964 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr21:6966381-6966069 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr21:26757638-26757320 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr21:39470674-39470361 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 320-621 |
| Cow position: | chr21:13299916-13300230 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 320-622 |
| Cow position: | chr21:27066505-27066196 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 325-664 |
| Cow position: | chr21:4738744-4739081 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 126, 83 |
| Conread position: | 327-656 |
| Cow position: | chr21:4266432-4266098 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 32, 86 |
| Conread position: | 338-622 |
| Cow position: | chr21:30297595-30297882 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 362-622 |
| Cow position: | chr21:17143830-17144091 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 76, 46 |
Show alignments to all cow chromosomes.