Cow genome map
| Conread name: | Pig4-TMW8055K04 |
| Conread position: | 279-621 |
| Cow position: | chr28:17600066-17599724 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 279-659 |
| Cow position: | chr28:32276475-32276872 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 72, 135 |
| Conread position: | 297-659 |
| Cow position: | chr28:10576078-10575718 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 300-664 |
| Cow position: | chr28:15004205-15004575 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 307-619 |
| Cow position: | chr28:15352169-15351856 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 307-619 |
| Cow position: | chr28:30966157-30966472 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 307-622 |
| Cow position: | chr28:7004974-7005297 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 107 |
| Conread position: | 307-622 |
| Cow position: | chr28:23619913-23620233 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 307-622 |
| Cow position: | chr28:28184333-28184661 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 49, 103 |
| Conread position: | 307-622 |
| Cow position: | chr28:29435838-29435531 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 39 |
| Conread position: | 307-644 |
| Cow position: | chr28:13880471-13880811 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 307-649 |
| Cow position: | chr28:526280-526628 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 307-662 |
| Cow position: | chr28:3645397-3645748 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 307-664 |
| Cow position: | chr28:4457273-4457644 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 307-664 |
| Cow position: | chr28:22153304-22153647 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 307-672 |
| Cow position: | chr28:12700598-12700966 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 308-619 |
| Cow position: | chr28:22200915-22201222 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 48 |
| Conread position: | 308-621 |
| Cow position: | chr28:3004573-3004250 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 308-622 |
| Cow position: | chr28:980315-979994 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 308-622 |
| Cow position: | chr28:12650179-12650489 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 308-622 |
| Cow position: | chr28:22230380-22230062 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 308-659 |
| Cow position: | chr28:10326009-10326367 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 309-622 |
| Cow position: | chr28:21568853-21569163 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 316-558 |
| Cow position: | chr28:25761845-25762090 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 316-579 |
| Cow position: | chr28:3189074-3188805 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 316-619 |
| Cow position: | chr28:5111765-5111454 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-619 |
| Cow position: | chr28:15600777-15600470 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 130 |
| Conread position: | 316-619 |
| Cow position: | chr28:33639527-33639837 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-621 |
| Cow position: | chr28:785624-785936 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-621 |
| Cow position: | chr28:1025374-1025064 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 316-621 |
| Cow position: | chr28:14149952-14150257 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 316-621 |
| Cow position: | chr28:19834064-19834383 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:1214873-1214560 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:1507833-1508146 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:2088531-2088845 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:3744929-3745233 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 316-622 |
| Cow position: | chr28:5211079-5211392 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 316-622 |
| Cow position: | chr28:5940443-5940756 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:8717996-8717683 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:12047579-12047267 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:15604568-15604887 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 316-622 |
| Cow position: | chr28:15917568-15917255 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:18517188-18516876 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 316-622 |
| Cow position: | chr28:20935456-20935142 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:22255241-22254928 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:24885818-24886130 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 316-622 |
| Cow position: | chr28:29036695-29036382 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:29823143-29823456 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:30097835-30098146 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 43, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:30534103-30533785 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr28:33255278-33255591 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 316-622 |
| Cow position: | chr28:34597201-34597514 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr28:5748749-5748418 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 317-559 |
| Cow position: | chr28:1164932-1164684 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 317-622 |
| Cow position: | chr28:1812001-1811703 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr28:7335941-7336253 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr28:15054118-15054426 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr28:24670752-24671064 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 90 |
| Conread position: | 317-622 |
| Cow position: | chr28:28935005-28934693 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 320-622 |
| Cow position: | chr28:14666108-14666415 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 320-657 |
| Cow position: | chr28:14229992-14229662 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 320-662 |
| Cow position: | chr28:17249620-17249276 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 322-622 |
| Cow position: | chr28:21768330-21768023 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 43, 91 |
| Conread position: | 331-622 |
| Cow position: | chr28:7744075-7744367 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 335-622 |
| Cow position: | chr28:17391409-17391703 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 335-622 |
| Cow position: | chr28:17663973-17663679 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 357-622 |
| Cow position: | chr28:9288390-9288123 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 81, 51 |
| Conread position: | 366-609 |
| Cow position: | chr28:6262363-6262606 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 666-812 |
| Cow position: | chr28:20310309-20310458 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 666-824 |
| Cow position: | chr28:22201325-22201482 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 669-808 |
| Cow position: | chr28:1655771-1655912 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 85, 57 |
Show alignments to all cow chromosomes.