Cow genome map
| Conread name: | Pig4-TMW8055K04 |
| Conread position: | 2-286 |
| Cow position: | chr9:9960699-9960989 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 299-664 |
| Cow position: | chr9:24630190-24630547 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 299-664 |
| Cow position: | chr9:43643854-43643468 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 56, 102 |
| Conread position: | 300-664 |
| Cow position: | chr9:3438379-3438727 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 303-629 |
| Cow position: | chr9:53776503-53776828 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 110 |
| Conread position: | 306-640 |
| Cow position: | chr9:11851059-11850719 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 109 |
| Conread position: | 307-603 |
| Cow position: | chr9:27004302-27004598 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 161, 49 |
| Conread position: | 307-622 |
| Cow position: | chr9:31093113-31092796 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 307-622 |
| Cow position: | chr9:33844820-33845146 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 106 |
| Conread position: | 307-664 |
| Cow position: | chr9:56166608-56166253 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 140, 46 |
| Conread position: | 308-622 |
| Cow position: | chr9:9958376-9958056 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 61, 99 |
| Conread position: | 308-628 |
| Cow position: | chr9:31810385-31810711 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 308-665 |
| Cow position: | chr9:36503858-36503505 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 309-622 |
| Cow position: | chr9:2208860-2208541 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 311-640 |
| Cow position: | chr9:26123534-26123859 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 315-606 |
| Cow position: | chr9:14794668-14794957 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 315-620 |
| Cow position: | chr9:26280659-26280968 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 95 |
| Conread position: | 316-565 |
| Cow position: | chr9:46669771-46670028 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 316-596 |
| Cow position: | chr9:52036495-52036776 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 107 |
| Conread position: | 316-596 |
| Cow position: | chr9:52037195-52037476 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 316-615 |
| Cow position: | chr9:64049090-64049395 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-620 |
| Cow position: | chr9:22655628-22655937 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 316-622 |
| Cow position: | chr9:777999-777685 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:3757016-3756702 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:3960352-3960055 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 316-622 |
| Cow position: | chr9:4940683-4940371 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:6365192-6365505 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:10325760-10326072 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:13472746-13472435 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:16178402-16178715 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:17303157-17302850 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 316-622 |
| Cow position: | chr9:21412127-21412438 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:21461294-21461594 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 95 |
| Conread position: | 316-622 |
| Cow position: | chr9:23421408-23421714 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:24918473-24918160 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:28658234-28657924 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:28785157-28785472 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:29193745-29193440 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 316-622 |
| Cow position: | chr9:30674890-30675203 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:37158795-37158482 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:42570031-42570342 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:43667646-43667956 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 316-622 |
| Cow position: | chr9:47170863-47171181 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 232 |
| Conread position: | 316-622 |
| Cow position: | chr9:55031330-55031633 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-622 |
| Cow position: | chr9:59480033-59479720 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-628 |
| Cow position: | chr9:52002280-52001976 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 316-640 |
| Cow position: | chr9:9015889-9016220 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr9:10856835-10857166 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr9:10939539-10939870 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 316-640 |
| Cow position: | chr9:12260549-12260219 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr9:18507009-18506678 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 316-640 |
| Cow position: | chr9:27037923-27038253 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-640 |
| Cow position: | chr9:34059818-34059487 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 316-662 |
| Cow position: | chr9:17870309-17870662 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 317-622 |
| Cow position: | chr9:1071468-1071156 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr9:2856660-2856972 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 317-622 |
| Cow position: | chr9:3061407-3061715 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 320-621 |
| Cow position: | chr9:32972186-32972494 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 322-619 |
| Cow position: | chr9:62669729-62669425 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 87 |
| Conread position: | 322-640 |
| Cow position: | chr9:6252389-6252714 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 322-832 |
| Cow position: | chr9:35593268-35592735 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 325-622 |
| Cow position: | chr9:1998471-1998168 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 327-622 |
| Cow position: | chr9:19156467-19156164 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 328-622 |
| Cow position: | chr9:38633607-38633910 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 86 |
| Conread position: | 338-619 |
| Cow position: | chr9:14797254-14797533 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 354-622 |
| Cow position: | chr9:6886454-6886722 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 415-590 |
| Cow position: | chr9:9246538-9246713 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 24 |
Show alignments to all cow chromosomes.