Cow genome map

Conread name: Pig4-TMW8055K04

Conread position: 278-664
Cow position: chrX:13888577-13888954 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 87

Conread position: 279-649
Cow position: chrX:17523540-17523162 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 245
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 134

Conread position: 279-660
Cow position: chrX:4327004-4326607 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 113

Conread position: 283-622
Cow position: chrX:24462749-24462402 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 132

Conread position: 299-640
Cow position: chrX:7572097-7572445 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 57, 114

Conread position: 300-565
Cow position: chrX:16301382-16301115 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 100

Conread position: 300-568
Cow position: chrX:16067668-16067392 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 54, 114

Conread position: 300-662
Cow position: chrX:5278625-5278265 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 238
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 113

Conread position: 300-662
Cow position: chrX:39765270-39765634 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 55, 80

Conread position: 307-589
Cow position: chrX:4134199-4133911 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 106

Conread position: 307-604
Cow position: chrX:5070848-5070553 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 43

Conread position: 307-615
Cow position: chrX:23269473-23269157 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 48, 94

Conread position: 307-618
Cow position: chrX:29880564-29880246 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 105

Conread position: 307-620
Cow position: chrX:37795743-37795421 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 40

Conread position: 307-620
Cow position: chrX:42223040-42222735 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 48

Conread position: 307-622
Cow position: chrX:322630-322950 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 48, 106

Conread position: 307-622
Cow position: chrX:3360536-3360857 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 106

Conread position: 307-622
Cow position: chrX:22579662-22579351 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 307-640
Cow position: chrX:26530687-26531027 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 106

Conread position: 307-652
Cow position: chrX:15377930-15377601 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 142, 47

Conread position: 307-658
Cow position: chrX:20652138-20652488 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 14

Conread position: 307-661
Cow position: chrX:24032262-24031911 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 105

Conread position: 307-663
Cow position: chrX:17610738-17610378 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 37

Conread position: 308-579
Cow position: chrX:19877559-19877835 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 105

Conread position: 308-581
Cow position: chrX:21646564-21646284 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 105

Conread position: 308-586
Cow position: chrX:41880406-41880123 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 110

Conread position: 308-609
Cow position: chrX:38588195-38587891 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 102

Conread position: 308-620
Cow position: chrX:25818104-25817783 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 104

Conread position: 308-622
Cow position: chrX:4342467-4342787 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 105

Conread position: 308-622
Cow position: chrX:29287711-29288033 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 115

Conread position: 308-622
Cow position: chrX:37487662-37487987 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 105

Conread position: 308-672
Cow position: chrX:23327089-23326716 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 246
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 108

Conread position: 309-622
Cow position: chrX:19398493-19398814 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 105

Conread position: 309-622
Cow position: chrX:28557082-28557402 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 8, 107

Conread position: 309-628
Cow position: chrX:9836628-9836956 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 88

Conread position: 311-660
Cow position: chrX:4413597-4413950 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 76

Conread position: 311-662
Cow position: chrX:19396950-19397306 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 102

Conread position: 316-565
Cow position: chrX:11074430-11074183 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 37

Conread position: 316-597
Cow position: chrX:24316539-24316825 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 97

Conread position: 316-614
Cow position: chrX:30286134-30286434 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 65

Conread position: 316-616
Cow position: chrX:45112530-45112831 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 99

Conread position: 316-619
Cow position: chrX:27591297-27590990 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 39, 84

Conread position: 316-620
Cow position: chrX:10867127-10866827 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 39

Conread position: 316-620
Cow position: chrX:13406563-13406252 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 97

Conread position: 316-621
Cow position: chrX:4767426-4767731 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 97

Conread position: 316-621
Cow position: chrX:9095366-9095678 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 97

Conread position: 316-621
Cow position: chrX:23279750-23280059 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:4906272-4905951 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 316-622
Cow position: chrX:5248115-5248426 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 85

Conread position: 316-622
Cow position: chrX:5354577-5354266 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:6236123-6235812 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 98

Conread position: 316-622
Cow position: chrX:7096182-7096495 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 93

Conread position: 316-622
Cow position: chrX:7484530-7484843 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:16702405-16702707 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 97

Conread position: 316-622
Cow position: chrX:16710690-16710992 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:16854642-16854329 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:17054294-17054604 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 70

Conread position: 316-622
Cow position: chrX:22492759-22493070 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 78

Conread position: 316-622
Cow position: chrX:23387812-23387497 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 40, 100

Conread position: 316-622
Cow position: chrX:24444332-24444019 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 97

Conread position: 316-622
Cow position: chrX:24589004-24588698 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 39

Conread position: 316-622
Cow position: chrX:24734387-24734700 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 94

Conread position: 316-622
Cow position: chrX:26274862-26275175 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 97

Conread position: 316-622
Cow position: chrX:26442524-26442214 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 16

Conread position: 316-622
Cow position: chrX:26446823-26447128 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 98

Conread position: 316-622
Cow position: chrX:26755916-26755603 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:28518988-28518684 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 96

Conread position: 316-622
Cow position: chrX:28879853-28879545 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:29916622-29916310 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 96

Conread position: 316-622
Cow position: chrX:30181201-30180888 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:32064444-32064132 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:32145533-32145219 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 97

Conread position: 316-622
Cow position: chrX:39548126-39548435 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 57

Conread position: 316-622
Cow position: chrX:39713274-39713587 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 94

Conread position: 316-622
Cow position: chrX:41156035-41156348 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 97

Conread position: 316-640
Cow position: chrX:11951047-11950716 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 97

Conread position: 316-640
Cow position: chrX:23395330-23395661 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 38, 94

Conread position: 316-640
Cow position: chrX:27317954-27318285 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 97

Conread position: 316-640
Cow position: chrX:30229388-30229059 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 39, 97

Conread position: 317-609
Cow position: chrX:21592017-21592316 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 96

Conread position: 317-620
Cow position: chrX:9535262-9535576 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 80

Conread position: 317-622
Cow position: chrX:7120331-7120643 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 96

Conread position: 317-622
Cow position: chrX:11409610-11409298 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 96

Conread position: 317-622
Cow position: chrX:13929009-13928706 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 121, 38

Conread position: 317-622
Cow position: chrX:18222137-18222451 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 96

Conread position: 317-622
Cow position: chrX:19474424-19474112 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 96

Conread position: 317-622
Cow position: chrX:24345773-24346085 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 96

Conread position: 317-622
Cow position: chrX:36194820-36195132 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 96

Conread position: 317-622
Cow position: chrX:40828379-40828070 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 96

Conread position: 320-622
Cow position: chrX:20800516-20800825 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 93

Conread position: 320-622
Cow position: chrX:21226207-21226515 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 94

Conread position: 320-622
Cow position: chrX:23342264-23341955 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 93

Conread position: 321-622
Cow position: chrX:18193418-18193726 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 92

Conread position: 353-660
Cow position: chrX:3122106-3121809 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 103, 55

Conread position: 357-629
Cow position: chrX:22616602-22616328 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 51

Conread position: 358-637
Cow position: chrX:10413200-10412925 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 86, 52

Conread position: 362-619
Cow position: chrX:864882-865141 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 46

Conread position: 362-622
Cow position: chrX:12997136-12996874 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 76, 46

Conread position: 362-622
Cow position: chrX:38228536-38228281 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 668-832
Cow position: chrX:12102820-12102653 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 115

Conread position: 668-832
Cow position: chrX:13800676-13800513 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 87, 27

Conread position: 668-832
Cow position: chrX:24006687-24006517 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Show alignments to all cow chromosomes.