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Cow genome map

           
Conread name:
           
Pig4-TMW8057K10
        

               
Conread position:
               
1-99
               

               
Cow position:
               
chr22:4156750-4156848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-101
               

               
Cow position:
               
chr22:11352385-11352485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-103
               

               
Cow position:
               
chr22:16724620-16724722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr22:12188414-12188527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr22:12195501-12195614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr22:23372797-23372913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr22:15737301-15737163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr22:10533660-10533516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr22:21304171-21304320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr22:12678355-12678506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
125, 99
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr22:16541585-16541738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
125, 106
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr22:25690208-25690369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr22:12749834-12749988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 128
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr22:18933649-18933813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 146
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr22:11697128-11697291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr22:26074988-26074822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr22:9597513-9597683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr22:27740957-27740791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr22:39215548-39215725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr22:23180975-23181150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
125, 113
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr22:6852517-6852696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr22:8800388-8800568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr22:34712793-34712605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr22:10919785-10919974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr22:27835600-27835411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr22:13849386-13849568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr22:4075819-4076012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr22:10609425-10609231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr22:12929213-12929397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr22:30111566-30111367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr22:33399422-33399609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr22:22155672-22155470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
118, 100
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr22:44410788-44410586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr22:18293698-18293901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr22:11766983-11767192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
125, 102
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr22:26316523-26316308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 53
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:16327564-16327340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:34618865-34618637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
109, 100
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:644701-644926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:13670100-13670335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:15025043-15025270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:20626904-20626676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:22908253-22908026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:37139502-37139277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr22:6096950-6097192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr22:23758945-23759177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr22:7165030-7164784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr22:14882049-14882272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr22:34750740-34750512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
191, 11
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr22:22223254-22223023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 100
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr22:38977908-38977675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr22:1309667-1309902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr22:1326486-1326247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr22:8412595-8412354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr22:8883078-8882850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr22:16533141-16532906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr22:38939874-38940123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr22:39472297-39472550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 125
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:2095620-2095377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 104
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:3987585-3987341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:10303083-10302839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
126, 104
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:11601099-11600863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:15338180-15337943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
126, 29
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:15490721-15490488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:16911728-16911965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:17126518-17126279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:18196577-18196338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:21502812-21502568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 138
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:23176374-23176616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
182, 103
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:23857113-23856877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:23980141-23980388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:35753242-35753477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr22:4535262-4535500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr22:6754199-6754427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr22:11257681-11257908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr22:17125649-17125409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr22:26184094-26184335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr22:44180660-44180418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
103, 159
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr22:8324306-8324069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
125, 87
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr22:7852031-7851779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
181, 113
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:13286515-13286267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:30483982-30483735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 91
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:2627647-2627391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 195
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:1975676-1975432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr22:38439090-38439343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 137
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr22:16044349-16044619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr22:22860845-22861102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 38
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr22:9283531-9283801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
124, 249
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:16621243-16620952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
127, 99
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:33448014-33448333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr22:32698827-32698525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 38
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr22:7153948-7153621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr22:27328826-27329151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr22:31870190-31870515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr22:9372588-9372251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
125, 136
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr22:23833363-23833027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 213
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr22:34616373-34616040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 176
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr22:14924665-14925000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 103
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr22:877582-877247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 299
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr22:10685024-10685358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr22:34398389-34398731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
2-135
               

               
Cow position:
               
chr22:28704250-28704117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 102
               

               
Conread position:
               
2-154
               

               
Cow position:
               
chr22:3301273-3301423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 106
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr22:24223136-24222991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr22:28290184-28290031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
124, 98
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr22:26122963-26122808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
126, 104
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr22:7832288-7832439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
2-166
               

               
Cow position:
               
chr22:10553619-10553783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
124, 102
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr22:14178761-14178934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
126, 98
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr22:12829543-12829727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr22:12892300-12892482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
98, 153
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr22:12389165-12388976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr22:43237342-43237528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr22:47555914-47555730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr22:28665349-28665163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
124, 99
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr22:1849140-1848946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr22:31154020-31153828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr22:25540065-25539849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 167
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr22:12573270-12573062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr22:25237073-25237306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr22:139235-139465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 5
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr22:2912523-2912743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
190, 37
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr22:34606657-34606422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr22:40789632-40789411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
124, 138
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr22:27322379-27322160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr22:24628592-24628814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
189, 37
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr22:10339053-10339278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr22:13769543-13769309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr22:21530293-21530516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr22:27047347-27047566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr22:1591090-1590850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:845969-845728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:864450-864692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:5616368-5616130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 111
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:12315876-12315637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:17294870-17295101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:19775366-19775600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:27577806-27577563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
124, 39
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:28071624-28071380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:30699247-30699005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 170
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:534565-534322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
124, 99
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:590405-590164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:3950318-3950075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:3965252-3965014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 100
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:4017539-4017304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:11458884-11458653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:17992965-17993202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 98
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:21355075-21355316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
190, 105
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:25221832-25222074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:30049500-30049744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
98, 127
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:30269474-30269242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:31592790-31593032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:36432907-36433141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:37029542-37029773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:43291836-43292072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr22:21890294-21890532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr22:3325654-3325408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr22:42612525-42612284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 104
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr22:44717787-44717536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr22:46567826-46568062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
126, 29
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr22:5337532-5337776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr22:41971088-41971336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 184
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr22:25742883-25743133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
97, 136
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr22:9127474-9127225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr22:14690905-14691153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
187, 96
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr22:15567950-15568195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr22:40349409-40349173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
190, 49
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr22:31646558-31646309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 140
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr22:43119663-43119909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 99
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr22:28357095-28356845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
190, 85
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr22:34726734-34726474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr22:8090466-8090743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr22:28057984-28058305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 298
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr22:37201915-37201593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
124, 97
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr22:38980953-38980643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr22:912164-911836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr22:4583628-4583303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr22:19047750-19048071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr22:26339820-26339491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 98
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr22:2623456-2623783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr22:16251507-16251832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr22:24175830-24176143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
189, 35
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr22:30964194-30963863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
95, 317
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr22:32188788-32189108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
120, 99
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr22:4060881-4061211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr22:43398068-43397744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
190, 99
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr22:3842683-3842350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr22:4645839-4645501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
128, 117
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr22:5467286-5467644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr22:7838656-7838329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr22:11613490-11613152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr22:14638411-14638742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr22:17814298-17813952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr22:24611027-24611352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr22:15668411-15668610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr22:45846207-45846010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
189, 25
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr22:23403575-23403808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr22:13841204-13840972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr22:11130935-11130700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 181
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr22:23121937-23122194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr22:3317186-3316954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 153
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr22:12968004-12968246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr22:15914983-15915292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr22:1911729-1911540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 100
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr22:27581504-27581275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr22:27274636-27274862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr22:21295661-21295896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr22:34441569-34441805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 126
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr22:10632978-10632744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr22:15090806-15090569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 115
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr22:25205907-25206143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 90
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr22:37324608-37324370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 102
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr22:22613170-22612931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 112
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr22:14844630-14844393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr22:2524027-2523780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr22:17764443-17764133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
5-99
               

               
Cow position:
               
chr22:30643071-30643165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-150
               

               
Cow position:
               
chr22:29344941-29344796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
5-160
               

               
Cow position:
               
chr22:13866728-13866570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 145
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr22:25254235-25254078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr22:27619797-27619620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr22:37030454-37030631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 88
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr22:17193453-17193276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr22:22013813-22013632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr22:2123355-2123174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 99
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr22:14091160-14091342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr22:16053370-16053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr22:21325670-21325852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr22:23830993-23830812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 137
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr22:19891021-19890838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
130, 98
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr22:27681784-27681565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 207
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr22:43131495-43131708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 149
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr22:5384718-5384490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr22:4988497-4988719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 128
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr22:15154064-15153838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr22:40120813-40121043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 145
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr22:3533996-3533776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr22:4990104-4990341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr22:36560596-36560830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
185, 12
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr22:1484926-1484688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 182
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr22:4108667-4108913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 143
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr22:10421095-10420857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
94, 145
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr22:21012447-21012216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
187, 7
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr22:23804913-23805156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr22:27550416-27550181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr22:46626317-46626548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr22:59673-59435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr22:5290913-5290671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
90, 100
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr22:10983413-10983173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 156
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr22:16273703-16273459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr22:31213642-31213402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr22:32326862-32326628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
122, 96
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr22:38930444-38930685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr22:12313487-12313246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr22:14378633-14378852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr22:26134161-26134408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr22:3252890-3253121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr22:1279322-1279565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr22:19341263-19341022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
177, 20
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr22:23806478-23806723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr22:36562956-36563205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 99
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr22:17132347-17132598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 93
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr22:12800734-12800429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr22:8116025-8116337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr22:4292810-4292505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr22:40387215-40386896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
184, 91
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr22:25943538-25943212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 92
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr22:32661572-32661247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr22:15068490-15068177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
99, 131
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr22:40374672-40374332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chr22:8733274-8733597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr22:14143051-14143382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr22:1858393-1858247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 97
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr22:13222179-13222006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
6-178
               

               
Cow position:
               
chr22:23735953-23736121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
6-190
               

               
Cow position:
               
chr22:16823162-16822981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr22:6936319-6936131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr22:2502887-2502672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
177, 43
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr22:6622185-6622426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
179, 92
               

               
Conread position:
               
7-138
               

               
Cow position:
               
chr22:45752876-45752739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
7-184
               

               
Cow position:
               
chr22:1265863-1266044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr22:21746707-21746520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
7-210
               

               
Cow position:
               
chr22:3282761-3282964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
7-224
               

               
Cow position:
               
chr22:5837331-5837112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr22:41829180-41829390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
185, 21
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr22:27825901-27825662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 120
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr22:29013941-29013703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr22:41853968-41853722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr22:26097559-26097792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr22:23827366-23827134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 104
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr22:18926417-18926169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 169
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr22:1874754-1874449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr22:9521205-9520881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr22:12681739-12682068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
101, 175
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr22:21568058-21567727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
121, 111
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr22:34475939-34476276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 301
               

               
Conread position:
               
8-189
               

               
Cow position:
               
chr22:14372230-14372065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
8-191
               

               
Cow position:
               
chr22:45132587-45132773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 181
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr22:32895277-32895057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr22:24734257-24734481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
10-312
               

               
Cow position:
               
chr22:23855031-23854711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
11-237
               

               
Cow position:
               
chr22:23689147-23689380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
11-238
               

               
Cow position:
               
chr22:34895024-34894801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 54
               

               
Conread position:
               
11-319
               

               
Cow position:
               
chr22:30515314-30514979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chr22:14835170-14835341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
114, 79
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr22:13094455-13094189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr22:28351605-28351825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
14-240
               

               
Cow position:
               
chr22:10677937-10678158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
14-280
               

               
Cow position:
               
chr22:20862696-20862986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
14-311
               

               
Cow position:
               
chr22:4135670-4135384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
253, 87
               

               
Conread position:
               
16-238
               

               
Cow position:
               
chr22:1640248-1640480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 82
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr22:41245299-41245072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr22:26969827-26969612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
24-240
               

               
Cow position:
               
chr22:29642158-29641936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 124
               

               
Conread position:
               
24-319
               

               
Cow position:
               
chr22:32480436-32480741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
28-191
               

               
Cow position:
               
chr22:3960243-3960406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
32-236
               

               
Cow position:
               
chr22:25629728-25629936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 64
               

               
Conread position:
               
32-240
               

               
Cow position:
               
chr22:15959731-15959948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
33-210
               

               
Cow position:
               
chr22:22553205-22553377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
158, 36
               

               
Conread position:
               
34-319
               

               
Cow position:
               
chr22:30710439-30710129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 292
               

               
Conread position:
               
37-191
               

               
Cow position:
               
chr22:42684940-42684785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 151
               

               
Conread position:
               
39-191
               

               
Cow position:
               
chr22:41044881-41045034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
39-236
               

               
Cow position:
               
chr22:36539635-36539842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr22:39494168-39494374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr22:10585674-10585874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 90
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr22:26659078-26658881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
43-311
               

               
Cow position:
               
chr22:6122879-6123163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr22:23865494-23865290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
44-317
               

               
Cow position:
               
chr22:41270977-41271264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
46-247
               

               
Cow position:
               
chr22:19787655-19787857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
47-227
               

               
Cow position:
               
chr22:10292988-10292801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
47-231
               

               
Cow position:
               
chr22:853042-852863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
47-313
               

               
Cow position:
               
chr22:32651525-32651237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
49-228
               

               
Cow position:
               
chr22:4974404-4974589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
49-247
               

               
Cow position:
               
chr22:11500798-11500601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
54-189
               

               
Cow position:
               
chr22:30712774-30712639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
54-193
               

               
Cow position:
               
chr22:15020384-15020520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
55-187
               

               
Cow position:
               
chr22:10363081-10362951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
55-228
               

               
Cow position:
               
chr22:12599100-12598922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
55-305
               

               
Cow position:
               
chr22:28731690-28731424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
57-191
               

               
Cow position:
               
chr22:11497212-11497077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
57-238
               

               
Cow position:
               
chr22:1602201-1602012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
57-243
               

               
Cow position:
               
chr22:6360475-6360664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
58-237
               

               
Cow position:
               
chr22:25342026-25341846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
60-230
               

               
Cow position:
               
chr22:18218881-18219056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
60-238
               

               
Cow position:
               
chr22:2216830-2216653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
72-237
               

               
Cow position:
               
chr22:26107055-26106884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
72-240
               

               
Cow position:
               
chr22:1821875-1822048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
77-224
               

               
Cow position:
               
chr22:1081497-1081344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
87-246
               

               
Cow position:
               
chr22:26123347-26123511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
102-237
               

               
Cow position:
               
chr22:3945143-3945000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.