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Cow genome map

           
Conread name:
           
Pig4-TMW8057K10
        

               
Conread position:
               
1-99
               

               
Cow position:
               
chr25:31762540-31762638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr25:36120566-36120408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
75, 96
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr25:34242036-34242195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 115
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr25:36555621-36555796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 86
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr25:12252741-12252920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr25:17474445-17474619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr25:13384519-13384343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr25:19317333-19317141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr25:30816957-30816766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr25:5474162-5474347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 116
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr25:1824029-1824219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:18201861-18202059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr25:1763155-1762942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr25:14255974-14255747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr25:27801346-27801128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr25:448097-448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr25:13387876-13387648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr25:17658679-17658449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 159
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr25:30462240-30462463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr25:35347971-35347744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:15409848-15410080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:41363082-41363316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
131, 83
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr25:24651381-24651618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr25:41107822-41107587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:8226171-8225928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:11436739-11436975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 164
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:15440709-15440953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:26259420-26259664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:61718-61487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:6474019-6474269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:10643241-10643480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
184, 92
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:12755411-12755666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:18905953-18905711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 99
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:23053625-23053386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
189, 99
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:25861282-25861530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
53, 190
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:35612245-35612472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 81
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:38135818-38135574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 233
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr25:36036711-36036952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 137
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr25:38425429-38425190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr25:16319072-16319308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 127
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr25:26338526-26338269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr25:3145912-3145656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr25:36017601-36017355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr25:14513183-14512849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 306
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr25:20019935-20020254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
184, 42
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr25:18564554-18564227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr25:11956872-11956553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
159, 102
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr25:10504273-10504611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr25:16064960-16064622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 302
               

               
Conread position:
               
2-96
               

               
Cow position:
               
chr25:13503500-13503406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-99
               

               
Cow position:
               
chr25:26161036-26160935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-109
               

               
Cow position:
               
chr25:35109202-35109309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-134
               

               
Cow position:
               
chr25:23817773-23817908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr25:26051970-26051814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr25:22730895-22730713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr25:17119809-17119622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr25:33457799-33457604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 126
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr25:19363992-19364193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 99
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr25:22756676-22756474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 98
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr25:18156219-18156426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr25:6688012-6687808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr25:8961837-8961632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr25:7380772-7380981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
145, 86
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr25:30619130-30618918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr25:34379038-34379258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 157
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr25:23779263-23779478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr25:8157441-8157670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr25:18266231-18265996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr25:20076564-20076333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr25:21893405-21893174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr25:26701094-26700873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
129, 37
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr25:36081942-36081709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr25:22750940-22751176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
134, 204
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr25:12817432-12817203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr25:19129922-19129680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr25:36762172-36761933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 101
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:7306359-7306128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:13272636-13272399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 169
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:18988457-18988206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:20023319-20023563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:22296959-22297192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:23917908-23917671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:26089746-26089984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:28187878-28188119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 77
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr25:33550578-33550335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr25:11131651-11131409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 204
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr25:11315969-11315734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr25:13569110-13569339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr25:14196930-14196684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr25:17144495-17144250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr25:5846742-5846980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr25:7216891-7216652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr25:13443343-13443616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr25:8576761-8576461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr25:9349216-9349524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr25:20008200-20007872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr25:37594473-37594145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
102, 174
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr25:38982160-38981844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr25:22242030-22241730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
183, 27
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr25:12840652-12840842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr25:16714203-16714387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 76
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr25:6961087-6961315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr25:26679292-26679065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr25:20785520-20785748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
122, 95
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr25:15377392-15377160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr25:14833595-14833829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr25:34768666-34768894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr25:12081256-12081583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
4-155
               

               
Cow position:
               
chr25:12807103-12806958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr25:25716711-25716537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 30
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr25:7581366-7581596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
121, 85
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr25:21245539-21245780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 102
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr25:21894820-21895059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr25:20069779-20069541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
188, 35
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr25:17704809-17704562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
179, 100
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr25:9269408-9269115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
188, 33
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr25:22531346-22531020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr25:788324-787994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
5-155
               

               
Cow position:
               
chr25:7023232-7023080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr25:26224965-26225131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
123, 101
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr25:33686621-33686787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr25:22317745-22317572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
130, 114
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr25:33959188-33959369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr25:11066079-11066265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr25:20664218-20664413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr25:7035620-7035430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr25:3373318-3373499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
123, 33
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr25:15634405-15634611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr25:20216897-20216692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 7
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr25:20157233-20157444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr25:9002736-9002513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 119
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr25:6996848-6996619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 49
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr25:20133250-20133476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr25:20348933-20348695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr25:5921008-5920771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr25:16921733-16921962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
187, 102
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr25:10217985-10218223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr25:17914844-17914607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr25:10407350-10407588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr25:25753932-25754167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr25:6885907-6886151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 115
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr25:26087583-26087343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr25:26134107-26133866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr25:26654971-26654740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr25:17566651-17566408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 95
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr25:21289409-21289164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 7
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr25:31230178-31230483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
187, 30
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr25:7010908-7011211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
99, 115
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr25:6463967-6464297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr25:33978154-33978469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr25:12260825-12261169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 163
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr25:13325644-13325327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 147
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr25:18294250-18294589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
104, 93
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr25:33663842-33664065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 152
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr25:21951193-21950956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr25:26457614-26457856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 214
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr25:14791817-14791574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
6-252
               

               
Cow position:
               
chr25:11585581-11585337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
121, 231
               

               
Conread position:
               
6-307
               

               
Cow position:
               
chr25:18487731-18487411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr25:17342520-17342279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr25:6803608-6803291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr25:11661757-11661990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr25:1838301-1837965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr25:24669385-24669604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
182, 52
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr25:16361614-16361752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
13-189
               

               
Cow position:
               
chr25:24504445-24504617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
13-238
               

               
Cow position:
               
chr25:12097896-12097672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
190, 85
               

               
Conread position:
               
25-238
               

               
Cow position:
               
chr25:13672439-13672218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
27-312
               

               
Cow position:
               
chr25:9956996-9957300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
28-311
               

               
Cow position:
               
chr25:9754055-9754342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
158, 70
               

               
Conread position:
               
31-240
               

               
Cow position:
               
chr25:16555804-16555586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
32-169
               

               
Cow position:
               
chr25:30450082-30449942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
32-240
               

               
Cow position:
               
chr25:12239110-12239320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
34-236
               

               
Cow position:
               
chr25:36535398-36535604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
35-237
               

               
Cow position:
               
chr25:36779535-36779323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
35-287
               

               
Cow position:
               
chr25:25827506-25827242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
39-209
               

               
Cow position:
               
chr25:22332788-22332620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
41-311
               

               
Cow position:
               
chr25:35333188-35332906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
43-186
               

               
Cow position:
               
chr25:7299182-7299336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
43-189
               

               
Cow position:
               
chr25:12997620-12997474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr25:1735294-1735486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr25:18894693-18894893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
43-319
               

               
Cow position:
               
chr25:11054928-11054653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
149, 11
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr25:26269912-26270107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
44-319
               

               
Cow position:
               
chr25:15319945-15319644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 99
               

               
Conread position:
               
45-190
               

               
Cow position:
               
chr25:13640405-13640263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr25:31732314-31732492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr25:21042408-21042219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
47-237
               

               
Cow position:
               
chr25:31705025-31704820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
47-237
               

               
Cow position:
               
chr25:31732712-31732905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
48-240
               

               
Cow position:
               
chr25:20211059-20211254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
79, 89
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr25:5791781-5791975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 77
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr25:41384061-41384253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr25:36033457-36033264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
54-228
               

               
Cow position:
               
chr25:6121754-6121931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 56
               

               
Conread position:
               
54-319
               

               
Cow position:
               
chr25:36124700-36124424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
55-176
               

               
Cow position:
               
chr25:21926542-21926664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
55-210
               

               
Cow position:
               
chr25:32587864-32588020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
55-236
               

               
Cow position:
               
chr25:5515028-5514838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
55-238
               

               
Cow position:
               
chr25:23323214-23323032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
55-238
               

               
Cow position:
               
chr25:35625170-35625346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
55-240
               

               
Cow position:
               
chr25:4002816-4002624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
55-246
               

               
Cow position:
               
chr25:9961159-9961356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
55-247
               

               
Cow position:
               
chr25:13736299-13736487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
55-312
               

               
Cow position:
               
chr25:12824003-12824283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr25:12204489-12204297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
58-189
               

               
Cow position:
               
chr25:13642301-13642431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
58-304
               

               
Cow position:
               
chr25:3983051-3982811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
59-237
               

               
Cow position:
               
chr25:10138104-10137925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
60-237
               

               
Cow position:
               
chr25:35345040-35344865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
62-238
               

               
Cow position:
               
chr25:8918269-8918445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 92
               

               
Conread position:
               
64-176
               

               
Cow position:
               
chr25:12691673-12691790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
65-238
               

               
Cow position:
               
chr25:7329553-7329374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr25:16001527-16001684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
71-230
               

               
Cow position:
               
chr25:14945452-14945614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
71-238
               

               
Cow position:
               
chr25:12520966-12521131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr25:36026994-36026837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
85-289
               

               
Cow position:
               
chr25:31055140-31055340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
97-232
               

               
Cow position:
               
chr25:10365780-10365919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 7
               
Show alignments to all cow chromosomes.