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Cow genome map

           
Conread name:
           
Pig4-TMW8057K10
        

               
Conread position:
               
1-107
               

               
Cow position:
               
chr3:64373110-64373217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr3:27976478-27976603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr3:11640779-11640641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr3:81277422-81277558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr3:18059749-18059594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr3:3656560-3656393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
127, 96
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr3:72503850-72504016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
92, 104
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr3:13380229-13380413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr3:51033412-51033243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr3:79884440-79884610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 59
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr3:3649178-3649347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr3:35055928-35056108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr3:36671949-36672120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr3:67520120-67520308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr3:48459283-48459473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr3:81359061-81359244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr3:19793545-19793731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
104, 8
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr3:2648464-2648653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 116
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr3:15443683-15443870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 56
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr3:20993859-20993670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
104, 77
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr3:58973342-58973161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
98, 105
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr3:20802585-20802766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr3:70333919-70334107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
125, 91
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr3:83215308-83215116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr3:27545773-27545967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr3:34871613-34871422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
103, 140
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr3:48900287-48900483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr3:3032453-3032256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr3:15153737-15153544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
95, 128
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr3:24468339-24468527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr3:71478643-71478436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr3:9663126-9663328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr3:32787506-32787304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 115
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr3:26874636-26874427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr3:48810599-48810800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
191, 100
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr3:24615800-24616003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr3:59040615-59040395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
121, 93
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr3:28898177-28898406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr3:79092346-79092579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr3:48241660-48241436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr3:53318447-53318218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
127, 93
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr3:59630467-59630684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr3:65058744-65058517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr3:79270911-79271146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr3:30222237-30222002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
46, 210
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr3:54373814-54374051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 106
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr3:59649304-59649070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 208
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr3:63269269-63269035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 99
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr3:43233552-43233314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
189, 96
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr3:50768725-50768489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 97
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr3:72473961-72473718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr3:2675075-2674835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
129, 103
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr3:23105316-23105560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
107, 130
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr3:30180132-30179889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr3:30463126-30463360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr3:45881944-45881715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
125, 106
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr3:49140003-49140230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr3:57624510-57624273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 97
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:8393393-8393155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
182, 38
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:18067178-18066944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:20841827-20842051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
184, 97
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:25690839-25690594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 115
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:27696932-27697174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
125, 97
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:29891363-29891609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 115
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:31309308-31309546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 97
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:46005976-46006222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:46901244-46901001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:53790491-53790732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:54100680-54100913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 92
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:55712486-55712234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:73395162-73394925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 61
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr3:17134380-17134147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
160, 98
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr3:2392922-2393159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr3:10896868-10896635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr3:14632937-14633181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
110, 167
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr3:52863138-52863379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
125, 91
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr3:74601160-74600919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 207
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr3:80818763-80818535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr3:55318851-55319101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
64, 173
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr3:78896693-78896451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr3:81087594-81087813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr3:15751667-15751923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr3:5044767-5045010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr3:57577743-57577494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr3:49790766-49791010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 85
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr3:53270876-53270629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
128, 103
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr3:80072175-80071919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr3:83491131-83490879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:71430158-71430416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr3:3985368-3985125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr3:17456222-17456474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 102
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr3:23471413-23471673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
99, 155
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr3:49327990-49327732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
94, 115
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr3:56059857-56059602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 209
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr3:81471050-81471306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
175, 97
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr3:38828805-38828556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
127, 80
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr3:66883898-66884153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 42
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr3:74878543-74878821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 97
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr3:14552921-14552637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr3:45897654-45897360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 204
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr3:45972402-45972696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 204
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr3:57760544-57760244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 102
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr3:44102014-44101702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr3:80468632-80468932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr3:31225478-31225163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr3:37041465-37041141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
92, 263
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr3:59000711-59001033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
191, 24
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr3:5365723-5365397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 100
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr3:8393988-8393670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr3:60597587-60597259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr3:72019162-72018829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr3:19711294-19711611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr3:34270959-34270635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr3:68587068-68586742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr3:59621602-59621901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr3:22221373-22221037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
2-99
               

               
Cow position:
               
chr3:21997743-21997840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-111
               

               
Cow position:
               
chr3:11292203-11292313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
2-125
               

               
Cow position:
               
chr3:45222108-45222232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
2-132
               

               
Cow position:
               
chr3:14547047-14546917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-133
               

               
Cow position:
               
chr3:53703918-53704052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
2-136
               

               
Cow position:
               
chr3:74900595-74900727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 99
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr3:27727786-27727938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr3:55984143-55983986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
2-166
               

               
Cow position:
               
chr3:33693864-33693699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr3:35621346-35621176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr3:56678304-56678481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr3:14194134-14194307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr3:73299123-73298958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr3:61169845-61169663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr3:55177701-55177881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr3:59474167-59473987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 145
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr3:84175778-84175959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr3:32457239-32457064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr3:78093344-78093524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
123, 99
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr3:3889523-3889708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr3:73820324-73820511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
97, 74
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr3:46541784-46541970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr3:55109568-55109759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr3:17058501-17058682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr3:24935410-24935215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
190, 98
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr3:19585908-19585705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr3:35153662-35153465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 138
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr3:26920953-26920745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr3:62046709-62046499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr3:58317903-58318114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 179
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr3:74846664-74846882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr3:19792950-19792716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr3:75045833-75046054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr3:76015337-76015114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr3:1517467-1517688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 185
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr3:18393349-18393572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr3:56332-56555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr3:7940512-7940741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr3:18459483-18459705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr3:20677797-20678020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr3:65413233-65413462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
128, 205
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr3:67930142-67930367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 7
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr3:67704591-67704354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr3:67744583-67744813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:23444843-23445084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
96, 142
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:38035545-38035786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:48296743-48296515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:53222058-53221820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:55085124-55085378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:59691932-59691710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
190, 21
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:64280885-64281126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:70565693-70565932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 100
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:71238198-71237962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:73764155-73764390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:74134749-74134511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:75050573-75050812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:77271233-77271461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr3:79292873-79292640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:3638223-3637991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:12711870-12712114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:17222097-17222339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 127
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:25477847-25477621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:48363117-48362890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
190, 36
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:51234051-51234287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:54946176-54945933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:55835776-55836020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:56476727-56476491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
94, 140
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:58968858-58969092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
190, 103
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:62826574-62826814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:68707968-68708199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:68881076-68881307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:70334650-70334894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
124, 99
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:71497093-71497336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
95, 158
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:73467676-73467427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr3:73759472-73759711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr3:34669688-34669924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr3:74079592-74079835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:5374373-5374140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:6873207-6873441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:23091931-23092176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:39171441-39171677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:39969817-39970065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:50614686-50614446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
96, 207
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:52652035-52652267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:53588339-53588584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 5
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:53739140-53739383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:57764263-57764030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:70896093-70895853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:73709092-73708855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
124, 101
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr3:76713280-76713515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr3:8061171-8060928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr3:9641613-9641365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 244
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr3:23169021-23169269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr3:26904155-26903918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr3:38691361-38691605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
68, 102
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr3:53150376-53150128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr3:13507513-13507267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 127
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr3:11712010-11711755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr3:54771051-54770807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr3:66292131-66292376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
96, 125
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr3:4319756-4319505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 98
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr3:34937889-34937635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr3:38347235-38346996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr3:70609671-70609417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr3:74533394-74533143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 102
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr3:76267930-76268186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
97, 254
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr3:58765030-58765295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 187
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr3:18686951-18686656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr3:15655101-15655405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr3:77365245-77365575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr3:20437611-20437927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
124, 97
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr3:17934893-17935209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 137
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr3:45648175-45647851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr3:17895894-17895567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr3:15506493-15506194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr3:63177528-63177226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
96, 190
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr3:71247066-71246749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr3:75711351-75711031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:5100727-5101049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
124, 102
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:54739842-54740160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:55272000-55272329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 302
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:80581700-80581382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:210364-210028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 140
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:31046907-31047236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr3:48252930-48252602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 126
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:10958195-10958524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
106, 293
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:21112593-21112917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:34556195-34556517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:59101872-59101539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:59597223-59596908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:61323376-61323058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:66609799-66610134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:71231440-71231110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:80053497-80053830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr3:24872749-24872445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr3:28908158-28908506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr3:60389808-60389628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr3:55819802-55819609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr3:79645392-79645584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr3:15228779-15228965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
123, 98
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr3:59884025-59884236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr3:77582149-77581945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr3:83845957-83845719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr3:78945798-78946023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr3:70401940-70401708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
123, 33
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr3:72676135-72675896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 95
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr3:26553671-26553905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr3:65800629-65800396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr3:83921228-83921001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr3:61278953-61278701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr3:7661896-7661601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr3:16656442-16656764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
4-158
               

               
Cow position:
               
chr3:65019822-65019976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr3:17235168-17235348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr3:5097250-5097065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 100
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr3:8733316-8733496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
155, 29
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr3:29360107-29360318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr3:22820614-22820375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr3:46350714-46350468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr3:54435019-54434778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr3:80565009-80564755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr3:37186870-37186623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
121, 115
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr3:19708065-19708381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr3:61840318-61840004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr3:65237067-65236738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 63
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr3:59799291-59798959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr3:58134644-58134814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr3:22510069-22509896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 99
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr3:64526890-64526717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 73
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr3:72342287-72342114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr3:52017813-52017634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr3:13890519-13890334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr3:26489038-26489223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr3:39661415-39661591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr3:81507069-81507250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 118
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr3:12978576-12978765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr3:23920387-23920578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 96
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr3:33329859-33329655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
93, 161
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr3:31850335-31850538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 53
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr3:59035082-59034861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr3:43727121-43726901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
89, 160
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr3:26982100-26981883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr3:31206918-31206687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr3:75687395-75687624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr3:13301808-13302036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr3:11987371-11987136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr3:29596432-29596200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
187, 117
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr3:49482674-49482903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr3:53046621-53046851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr3:67698318-67698085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr3:77188480-77188248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
185, 98
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:188914-188668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:2025240-2024993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 214
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:2680555-2680321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:21547058-21547293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:25945135-25944886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:26960546-26960786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 95
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:36375498-36375739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:49650430-49650189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
101, 96
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:52608224-52607992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
104, 96
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:53592647-53592892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 84
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:67929218-67929459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
121, 84
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr3:79591849-79592080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr3:2216410-2216166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr3:59366595-59366354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
123, 7
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr3:60933459-60933222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr3:61539843-61539603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr3:68648216-68647967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr3:53113217-53112973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr3:14263435-14263192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr3:61857548-61857296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr3:68582957-68583203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr3:51578279-51578520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr3:49382991-49382747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
107, 81
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr3:35852429-35852672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
94, 137
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr3:68145801-68146109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 89
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr3:14626108-14626439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr3:17957509-17957178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr3:37599386-37599705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 96
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr3:1830534-1830861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr3:14465664-14466000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 147
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr3:24548795-24549128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 208
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr3:53384238-53384579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr3:58767305-58766993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr3:42480660-42480426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 152
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr3:6690041-6689795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr3:82461220-82460897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
122, 100
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr3:4050234-4049926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
7-151
               

               
Cow position:
               
chr3:75238497-75238354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 94
               

               
Conread position:
               
7-174
               

               
Cow position:
               
chr3:21014916-21015087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
7-177
               

               
Cow position:
               
chr3:5366808-5366641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
7-189
               

               
Cow position:
               
chr3:11199939-11200122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr3:42423288-42423515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr3:66900693-66900927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr3:45211341-45211110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 154
               

               
Conread position:
               
7-233
               

               
Cow position:
               
chr3:83797794-83798029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr3:45279506-45279270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 87
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr3:7566377-7566610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
86, 153
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr3:49460886-49461128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr3:55970547-55970313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
121, 95
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr3:57754436-57754675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr3:61171467-61171701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr3:72391122-72390889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 94
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr3:2506438-2506674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr3:66708026-66708269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr3:61894127-61894375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
7-261
               

               
Cow position:
               
chr3:74502285-74502541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
176, 94
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chr3:53091531-53091236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
118, 97
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr3:15954045-15954373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
101, 94
               

               
Conread position:
               
8-214
               

               
Cow position:
               
chr3:32183979-32184188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr3:80740601-80740389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr3:84596925-84597143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr3:53094892-53095131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 100
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr3:33698769-33698516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr3:65969204-65969020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
11-238
               

               
Cow position:
               
chr3:44932552-44932317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
11-243
               

               
Cow position:
               
chr3:64172476-64172245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
185, 102
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chr3:75158397-75158085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
105, 67
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chr3:76138507-76138201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr3:2850863-2851051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr3:15051916-15052212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
14-189
               

               
Cow position:
               
chr3:80953680-80953505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr3:43528199-43528431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 177
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr3:35005809-35005586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
16-230
               

               
Cow position:
               
chr3:63179888-63179679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
169, 81
               

               
Conread position:
               
16-238
               

               
Cow position:
               
chr3:29807494-29807271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
16-238
               

               
Cow position:
               
chr3:83201493-83201719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
17-238
               

               
Cow position:
               
chr3:70632051-70631823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
18-221
               

               
Cow position:
               
chr3:15992747-15992541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 191
               

               
Conread position:
               
19-233
               

               
Cow position:
               
chr3:60892653-60892442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr3:55106416-55106632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
101, 74
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr3:13899424-13899644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr3:55947607-55947384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
25-189
               

               
Cow position:
               
chr3:74500265-74500097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
25-238
               

               
Cow position:
               
chr3:45524289-45524069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
161, 216
               

               
Conread position:
               
25-311
               

               
Cow position:
               
chr3:66375342-66375033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
26-319
               

               
Cow position:
               
chr3:39328421-39328116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
70, 192
               

               
Conread position:
               
28-189
               

               
Cow position:
               
chr3:26739395-26739558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
31-214
               

               
Cow position:
               
chr3:5416204-5416387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
31-228
               

               
Cow position:
               
chr3:14625374-14625574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
31-238
               

               
Cow position:
               
chr3:14601695-14601908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
95, 74
               

               
Conread position:
               
32-240
               

               
Cow position:
               
chr3:18458643-18458852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
160, 133
               

               
Conread position:
               
39-189
               

               
Cow position:
               
chr3:71238483-71238332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr3:80081805-80082003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 187
               

               
Conread position:
               
39-233
               

               
Cow position:
               
chr3:53240268-53240082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr3:5899833-5899630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr3:13329766-13329967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr3:27544327-27544523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
39-287
               

               
Cow position:
               
chr3:77227335-77227077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 241
               

               
Conread position:
               
39-294
               

               
Cow position:
               
chr3:16254826-16255072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
193, 54
               

               
Conread position:
               
39-310
               

               
Cow position:
               
chr3:75057122-75057400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
41-178
               

               
Cow position:
               
chr3:28323184-28323052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 113
               

               
Conread position:
               
42-184
               

               
Cow position:
               
chr3:34861695-34861556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
43-178
               

               
Cow position:
               
chr3:9638369-9638502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
43-226
               

               
Cow position:
               
chr3:23037616-23037810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr3:54960193-54959996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr3:42178161-42177967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
43-250
               

               
Cow position:
               
chr3:84000617-84000412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
43-253
               

               
Cow position:
               
chr3:9843591-9843375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
43-254
               

               
Cow position:
               
chr3:14598951-14598736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
43-312
               

               
Cow position:
               
chr3:59515108-59514822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 54
               

               
Conread position:
               
43-318
               

               
Cow position:
               
chr3:8147663-8147958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
43-319
               

               
Cow position:
               
chr3:49218310-49218603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
43-319
               

               
Cow position:
               
chr3:69849503-69849798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
44-224
               

               
Cow position:
               
chr3:83707970-83708149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr3:16362732-16362929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr3:79207983-79208194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
44-240
               

               
Cow position:
               
chr3:21693954-21693748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
44-311
               

               
Cow position:
               
chr3:23877000-23876710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
45-222
               

               
Cow position:
               
chr3:77729458-77729276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
46-238
               

               
Cow position:
               
chr3:15859665-15859862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
46-247
               

               
Cow position:
               
chr3:4031975-4031771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 163
               

               
Conread position:
               
46-250
               

               
Cow position:
               
chr3:49231019-49230805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
47-230
               

               
Cow position:
               
chr3:15752631-15752818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
47-237
               

               
Cow position:
               
chr3:48578840-48578645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
47-312
               

               
Cow position:
               
chr3:78894325-78894603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
49-190
               

               
Cow position:
               
chr3:53192428-53192564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
49-191
               

               
Cow position:
               
chr3:15232029-15231887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
49-192
               

               
Cow position:
               
chr3:15790553-15790416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
49-232
               

               
Cow position:
               
chr3:28692431-28692623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr3:29813243-29813052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
51-193
               

               
Cow position:
               
chr3:44622890-44623030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr3:57553852-57554039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr3:49731642-49731916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 157
               

               
Conread position:
               
54-228
               

               
Cow position:
               
chr3:44534766-44534952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
54-236
               

               
Cow position:
               
chr3:25060073-25059884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
55-192
               

               
Cow position:
               
chr3:1534624-1534764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
55-228
               

               
Cow position:
               
chr3:42483900-42483715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr3:82657095-82657279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
55-238
               

               
Cow position:
               
chr3:63860897-63861092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr3:61024309-61024500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
55-250
               

               
Cow position:
               
chr3:41366988-41367189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 134
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr3:59271535-59271264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 179
               

               
Conread position:
               
56-187
               

               
Cow position:
               
chr3:76169293-76169424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
58-215
               

               
Cow position:
               
chr3:27247200-27247358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
58-237
               

               
Cow position:
               
chr3:73590005-73590193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
59-306
               

               
Cow position:
               
chr3:30701298-30701039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
60-233
               

               
Cow position:
               
chr3:45313037-45312863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
60-240
               

               
Cow position:
               
chr3:59885380-59885191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
60-274
               

               
Cow position:
               
chr3:3062555-3062339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 183
               

               
Conread position:
               
62-233
               

               
Cow position:
               
chr3:17952643-17952470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
62-233
               

               
Cow position:
               
chr3:47284821-47284647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
62-295
               

               
Cow position:
               
chr3:2903308-2903562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-237
               

               
Cow position:
               
chr3:15661721-15661894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
70-237
               

               
Cow position:
               
chr3:4087182-4087360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
70-237
               

               
Cow position:
               
chr3:27212341-27212172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
70-240
               

               
Cow position:
               
chr3:25691728-25691556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
70-240
               

               
Cow position:
               
chr3:67161921-67161743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
71-240
               

               
Cow position:
               
chr3:45307912-45307741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
78-238
               

               
Cow position:
               
chr3:42588329-42588158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
81-237
               

               
Cow position:
               
chr3:78739824-78739667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
84-319
               

               
Cow position:
               
chr3:522667-522429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 18
               
Show alignments to all cow chromosomes.