Cow genome map
| Conread name: | Pig4-TMW8063I06 |
| Conread position: | 1-386 |
| Cow position: | chr1:79002459-79002059 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 22 |
| Conread position: | 1-387 |
| Cow position: | chr1:22227358-22227747 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 1-391 |
| Cow position: | chr1:68783161-68782752 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 22 |
| Conread position: | 1-392 |
| Cow position: | chr1:37310019-37309609 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 1-405 |
| Cow position: | chr1:63240462-63240866 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 294 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 147, 25 |
| Conread position: | 3-376 |
| Cow position: | chr1:85865297-85865673 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 20 |
| Conread position: | 9-394 |
| Cow position: | chr1:44769609-44769205 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 9-497 |
| Cow position: | chr1:53208194-53207670 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 33-376 |
| Cow position: | chr1:56225001-56225356 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 45-391 |
| Cow position: | chr1:92048367-92048738 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 62-386 |
| Cow position: | chr1:89834802-89835130 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 106, 47 |
| Conread position: | 63-391 |
| Cow position: | chr1:81228771-81228435 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 74-476 |
| Cow position: | chr1:22730333-22730748 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 75-386 |
| Cow position: | chr1:31765823-31765493 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 80-389 |
| Cow position: | chr1:48083135-48083457 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 91-509 |
| Cow position: | chr1:22823526-22823950 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 116-402 |
| Cow position: | chr1:91817161-91816851 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 122-391 |
| Cow position: | chr1:48444562-48444291 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 16, 211 |
| Conread position: | 140-384 |
| Cow position: | chr1:1877665-1877926 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 151-416 |
| Cow position: | chr1:91066502-91066218 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 151-420 |
| Cow position: | chr1:69695360-69695072 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 157-391 |
| Cow position: | chr1:20204677-20204931 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 185-379 |
| Cow position: | chr1:31845716-31845920 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 116 |
| Conread position: | 190-391 |
| Cow position: | chr1:95100652-95100866 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 191-379 |
| Cow position: | chr1:4573220-4573414 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 191-391 |
| Cow position: | chr1:98360727-98360500 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 211-469 |
| Cow position: | chr1:24528890-24528614 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 225-391 |
| Cow position: | chr1:40599773-40599946 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 246-391 |
| Cow position: | chr1:21835704-21835848 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 5 |
| Conread position: | 246-391 |
| Cow position: | chr1:75967192-75967334 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 257-391 |
| Cow position: | chr1:42555036-42555166 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 257-391 |
| Cow position: | chr1:51394185-51394324 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 128 |
| Conread position: | 257-405 |
| Cow position: | chr1:3244616-3244772 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 128 |
| Conread position: | 257-497 |
| Cow position: | chr1:51531539-51531789 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 136, 61 |
| Conread position: | 260-391 |
| Cow position: | chr1:32631235-32631370 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 80, 74 |
| Conread position: | 260-402 |
| Cow position: | chr1:25886306-25886157 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 261-488 |
| Cow position: | chr1:1348053-1347824 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 181 |
| Conread position: | 263-391 |
| Cow position: | chr1:64160112-64160243 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 263-445 |
| Cow position: | chr1:29935610-29935420 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 149 |
| Conread position: | 264-396 |
| Cow position: | chr1:47658126-47658257 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 77 |
| Conread position: | 264-482 |
| Cow position: | chr1:31348137-31347914 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 122, 85 |
| Conread position: | 265-391 |
| Cow position: | chr1:74084418-74084292 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 274-497 |
| Cow position: | chr1:8287831-8287596 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 187 |
Show alignments to all cow chromosomes.