Cow genome map


           Conread name:
           Pig4-TMW8063I06
        

               Conread position:
               1-469
               

               Cow position:
               chr23:25865195-25864696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 22
               

               Conread position:
               1-508
               

               Cow position:
               chr23:7596834-7596306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 22
               

               Conread position:
               3-381
               

               Cow position:
               chr23:29471606-29471234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               256, 20
               

               Conread position:
               4-391
               

               Cow position:
               chr23:11973351-11973763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               44-405
               

               Cow position:
               chr23:21659486-21659857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               60-391
               

               Cow position:
               chr23:1924288-1923938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 42
               

               Conread position:
               132-390
               

               Cow position:
               chr23:23470571-23470839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 179
               

               Conread position:
               164-391
               

               Cow position:
               chr23:37065496-37065741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               170-391
               

               Cow position:
               chr23:5162088-5162326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 64
               

               Conread position:
               196-380
               

               Cow position:
               chr23:7937849-7937654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               48, 82
               

               Conread position:
               203-391
               

               Cow position:
               chr23:3247285-3247483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               257-401
               

               Cow position:
               chr23:38414196-38414047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               258-391
               

               Cow position:
               chr23:15287372-15287231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               82, 129
               

               Conread position:
               260-376
               

               Cow position:
               chr23:10868525-10868641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               260-391
               

               Cow position:
               chr23:20057103-20056964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               260-393
               

               Cow position:
               chr23:27544596-27544730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 120
               

               Conread position:
               261-391
               

               Cow position:
               chr23:25378421-25378553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               264-482
               

               Cow position:
               chr23:10876197-10876415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 34
               

               Conread position:
               305-543
               

               Cow position:
               chr23:3955260-3955498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 39
               
Show alignments to all cow chromosomes.