Cow genome map
| Conread name: | Pig4-TMW8063I06 |
| Conread position: | 1-375 |
| Cow position: | chrX:27446212-27446599 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 1-376 |
| Cow position: | chrX:17497613-17497995 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 22 |
| Conread position: | 1-381 |
| Cow position: | chrX:42994140-42994531 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 21 |
| Conread position: | 1-386 |
| Cow position: | chrX:13852004-13852396 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 136, 21 |
| Conread position: | 1-391 |
| Cow position: | chrX:7695297-7695672 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 147, 22 |
| Conread position: | 1-400 |
| Cow position: | chrX:8869868-8869468 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 22 |
| Conread position: | 46-381 |
| Cow position: | chrX:28847321-28846967 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 63 |
| Conread position: | 74-382 |
| Cow position: | chrX:42247592-42247269 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 107-391 |
| Cow position: | chrX:41743534-41743835 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 289 |
| Conread position: | 108-379 |
| Cow position: | chrX:31373200-31373478 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 113 |
| Conread position: | 123-394 |
| Cow position: | chrX:25283503-25283223 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 265 |
| Conread position: | 126-420 |
| Cow position: | chrX:7381964-7382274 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 151-391 |
| Cow position: | chrX:6234768-6234529 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 158-391 |
| Cow position: | chrX:25337850-25338106 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 158-391 |
| Cow position: | chrX:42855084-42855338 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 186-429 |
| Cow position: | chrX:41238661-41238403 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 206 |
| Conread position: | 203-379 |
| Cow position: | chrX:37836308-37836501 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 232-380 |
| Cow position: | chrX:23497915-23497754 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 246-391 |
| Cow position: | chrX:19930432-19930580 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 91, 5 |
| Conread position: | 246-391 |
| Cow position: | chrX:34543563-34543711 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 94, 5 |
| Conread position: | 246-394 |
| Cow position: | chrX:20151626-20151774 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 246-482 |
| Cow position: | chrX:32128204-32127951 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 5 |
| Conread position: | 248-482 |
| Cow position: | chrX:4044074-4043823 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 257-376 |
| Cow position: | chrX:37574642-37574761 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-391 |
| Cow position: | chrX:37489516-37489651 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 259-391 |
| Cow position: | chrX:20752047-20752178 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 260-387 |
| Cow position: | chrX:45787443-45787573 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 263-391 |
| Cow position: | chrX:42492723-42492590 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 264-383 |
| Cow position: | chrX:26876089-26875967 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 19 |
Show alignments to all cow chromosomes.