Cow genome map
| Conread name: | Pig4-TMW8063P09 |
| Conread position: | 1-242 |
| Cow position: | chr14:28755166-28754922 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 34, 103 |
| Conread position: | 1-244 |
| Cow position: | chr14:33534430-33534196 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 92, 34 |
| Conread position: | 1-245 |
| Cow position: | chr14:43375683-43375930 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 5-123 |
| Cow position: | chr14:2343691-2343810 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 5-232 |
| Cow position: | chr14:45780062-45780291 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 5-233 |
| Cow position: | chr14:38359587-38359366 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 5-234 |
| Cow position: | chr14:47013689-47013454 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 5-241 |
| Cow position: | chr14:18428792-18429028 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 139, 93 |
| Conread position: | 5-242 |
| Cow position: | chr14:1068643-1068398 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 5-242 |
| Cow position: | chr14:23148808-23149046 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 5-242 |
| Cow position: | chr14:26040630-26040873 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 5-243 |
| Cow position: | chr14:1533897-1533656 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 5-243 |
| Cow position: | chr14:23149838-23150087 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 5-244 |
| Cow position: | chr14:12246720-12246966 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 30, 99 |
| Conread position: | 5-244 |
| Cow position: | chr14:15756799-15756554 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 5-244 |
| Cow position: | chr14:20690337-20690090 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 5-244 |
| Cow position: | chr14:20887505-20887267 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 87 |
| Conread position: | 5-245 |
| Cow position: | chr14:8456609-8456859 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-245 |
| Cow position: | chr14:37249783-37249536 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 5-246 |
| Cow position: | chr14:7149361-7149119 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 5-247 |
| Cow position: | chr14:5569960-5570208 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 196 |
| Conread position: | 11-241 |
| Cow position: | chr14:20883223-20883457 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 11-242 |
| Cow position: | chr14:45731220-45730995 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 113, 37 |
| Conread position: | 11-243 |
| Cow position: | chr14:7115881-7116132 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 24, 200 |
| Conread position: | 11-243 |
| Cow position: | chr14:45594533-45594774 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 11-248 |
| Cow position: | chr14:50468675-50468433 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 149 |
| Conread position: | 12-219 |
| Cow position: | chr14:5356986-5356768 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 12-224 |
| Cow position: | chr14:25504575-25504363 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 12-244 |
| Cow position: | chr14:11104427-11104653 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 12-244 |
| Cow position: | chr14:25935442-25935211 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 12-245 |
| Cow position: | chr14:10081950-10081705 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 29-242 |
| Cow position: | chr14:13153312-13153097 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 29-242 |
| Cow position: | chr14:18579252-18579465 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 61, 145 |
| Conread position: | 29-242 |
| Cow position: | chr14:26194382-26194172 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 29-242 |
| Cow position: | chr14:46392476-46392688 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 29-243 |
| Cow position: | chr14:26264901-26265117 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 33-186 |
| Cow position: | chr14:23755078-23754924 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 38-247 |
| Cow position: | chr14:1858129-1857921 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 50-243 |
| Cow position: | chr14:49763371-49763179 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 76 |
| Conread position: | 55-245 |
| Cow position: | chr14:18439548-18439733 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 126, 99 |
| Conread position: | 55-261 |
| Cow position: | chr14:33456642-33456436 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-247 |
| Cow position: | chr14:13722308-13722130 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 76-249 |
| Cow position: | chr14:32797689-32797516 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 84-244 |
| Cow position: | chr14:34097403-34097562 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 89-242 |
| Cow position: | chr14:30647644-30647492 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 97-242 |
| Cow position: | chr14:33436316-33436172 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 95 |
| Conread position: | 99-244 |
| Cow position: | chr14:46564629-46564487 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 108-245 |
| Cow position: | chr14:25503094-25502962 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.