Cow genome map
| Conread name: | Pig4-TMW8063P09 |
| Conread position: | 1-231 |
| Cow position: | chr15:4332610-4332839 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 64, 98 |
| Conread position: | 1-238 |
| Cow position: | chr15:26133671-26133923 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 213 |
| Conread position: | 1-242 |
| Cow position: | chr15:1036951-1036699 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 1-243 |
| Cow position: | chr15:9369918-9370166 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 1-244 |
| Cow position: | chr15:433170-433413 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 92 |
| Conread position: | 1-247 |
| Cow position: | chr15:8284728-8284973 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 2-243 |
| Cow position: | chr15:5225131-5225376 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 3-241 |
| Cow position: | chr15:10748350-10748591 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 4-249 |
| Cow position: | chr15:42659942-42660191 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 194 |
| Conread position: | 5-161 |
| Cow position: | chr15:14219157-14218995 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 5-241 |
| Cow position: | chr15:40490342-40490592 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 5-242 |
| Cow position: | chr15:45797804-45797564 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 5-243 |
| Cow position: | chr15:11676885-11676642 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 5-244 |
| Cow position: | chr15:26624739-26624504 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 5-244 |
| Cow position: | chr15:35451759-35451523 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 5-248 |
| Cow position: | chr15:30559822-30560066 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 5-249 |
| Cow position: | chr15:11730283-11730048 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 5-261 |
| Cow position: | chr15:41208194-41208452 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 6-249 |
| Cow position: | chr15:30945354-30945120 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 11-233 |
| Cow position: | chr15:52816645-52816431 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 11-242 |
| Cow position: | chr15:25075989-25076217 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 11-248 |
| Cow position: | chr15:50104449-50104207 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 15-242 |
| Cow position: | chr15:52629231-52629459 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 29-236 |
| Cow position: | chr15:9277638-9277432 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 29-241 |
| Cow position: | chr15:42381925-42381727 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 29-242 |
| Cow position: | chr15:22336958-22337173 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 29-243 |
| Cow position: | chr15:44903523-44903310 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 96, 77 |
| Conread position: | 29-243 |
| Cow position: | chr15:44962966-44963188 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 72 |
| Conread position: | 29-243 |
| Cow position: | chr15:46340871-46341082 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 29-247 |
| Cow position: | chr15:23339332-23339121 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 34-243 |
| Cow position: | chr15:39802908-39803112 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 45-243 |
| Cow position: | chr15:36382197-36381998 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 50-242 |
| Cow position: | chr15:9182892-9182699 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 60-242 |
| Cow position: | chr15:1258940-1259130 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 93-248 |
| Cow position: | chr15:233139-232984 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 99 |
| Conread position: | 97-246 |
| Cow position: | chr15:50732081-50731934 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 108-242 |
| Cow position: | chr15:15632558-15632427 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 112-241 |
| Cow position: | chr15:33849557-33849685 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 80 |
Show alignments to all cow chromosomes.