Cow genome map
| Conread name: | Pig4-TMW8063P09 |
| Conread position: | 1-240 |
| Cow position: | chr16:31529178-31529426 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 1-240 |
| Cow position: | chr16:47871386-47871146 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 1-242 |
| Cow position: | chr16:33439930-33440175 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-242 |
| Cow position: | chr16:49979145-49979393 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 1-244 |
| Cow position: | chr16:21558185-21558437 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-248 |
| Cow position: | chr16:13924935-13924678 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 1-249 |
| Cow position: | chr16:54014814-54015059 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 2-242 |
| Cow position: | chr16:29626269-29626025 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 33, 205 |
| Conread position: | 4-232 |
| Cow position: | chr16:27275011-27274781 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 5-172 |
| Cow position: | chr16:47185005-47185175 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 5-233 |
| Cow position: | chr16:24173648-24173413 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 5-241 |
| Cow position: | chr16:56078849-56079088 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 5-242 |
| Cow position: | chr16:19491487-19491255 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 5-242 |
| Cow position: | chr16:37225579-37225337 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 5-242 |
| Cow position: | chr16:53198346-53198106 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 5-243 |
| Cow position: | chr16:2249976-2250216 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 5-243 |
| Cow position: | chr16:16599976-16600218 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 5-244 |
| Cow position: | chr16:13497120-13496860 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 5-244 |
| Cow position: | chr16:15433911-15434165 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 6-203 |
| Cow position: | chr16:33644264-33644063 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 163 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 190 |
| Conread position: | 6-243 |
| Cow position: | chr16:18054579-18054822 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 7-243 |
| Cow position: | chr16:9955004-9955244 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 189 |
| Conread position: | 11-189 |
| Cow position: | chr16:23946529-23946714 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 11-242 |
| Cow position: | chr16:47743104-47743347 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 105 |
| Conread position: | 11-242 |
| Cow position: | chr16:54017096-54017333 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 11-243 |
| Cow position: | chr16:40502956-40502721 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 12-220 |
| Cow position: | chr16:28198534-28198321 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 13-242 |
| Cow position: | chr16:40517504-40517273 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 14-242 |
| Cow position: | chr16:49208453-49208219 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 21, 163 |
| Conread position: | 28-242 |
| Cow position: | chr16:19910441-19910237 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 55 |
| Conread position: | 29-241 |
| Cow position: | chr16:11171913-11172124 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 29-243 |
| Cow position: | chr16:23948226-23948438 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 29-243 |
| Cow position: | chr16:34614000-34614215 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 29-243 |
| Cow position: | chr16:40516476-40516269 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 29-246 |
| Cow position: | chr16:12114149-12114349 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 69 |
| Conread position: | 43-242 |
| Cow position: | chr16:35281280-35281470 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 51-238 |
| Cow position: | chr16:31133417-31133593 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 58-246 |
| Cow position: | chr16:30655418-30655607 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 61-243 |
| Cow position: | chr16:40128753-40128935 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 63-247 |
| Cow position: | chr16:4614853-4615035 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 73-249 |
| Cow position: | chr16:54304890-54305060 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 73-254 |
| Cow position: | chr16:56203013-56203192 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 79-243 |
| Cow position: | chr16:29661528-29661693 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 114 |
| Conread position: | 89-254 |
| Cow position: | chr16:3890010-3890173 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 8 |
| Conread position: | 108-240 |
| Cow position: | chr16:45601273-45601405 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.