Cow genome map
| Conread name: | Pig4-TMW8063P09 |
| Conread position: | 1-228 |
| Cow position: | chr17:17907244-17907476 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 1-250 |
| Cow position: | chr17:36038853-36039108 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 5-178 |
| Cow position: | chr17:5311-5133 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 5-196 |
| Cow position: | chr17:21898467-21898653 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 5-224 |
| Cow position: | chr17:27593299-27593521 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 5-226 |
| Cow position: | chr17:1101310-1101535 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 29, 188 |
| Conread position: | 5-241 |
| Cow position: | chr17:22808651-22808424 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 129 |
| Conread position: | 5-242 |
| Cow position: | chr17:21905284-21905039 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 5-242 |
| Cow position: | chr17:27865394-27865635 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 5-242 |
| Cow position: | chr17:35265160-35264926 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 5-243 |
| Cow position: | chr17:3829876-3830117 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 107 |
| Conread position: | 5-243 |
| Cow position: | chr17:3836591-3836839 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 5-243 |
| Cow position: | chr17:8303700-8303933 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 5-243 |
| Cow position: | chr17:26653013-26652773 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 5-244 |
| Cow position: | chr17:26654635-26654878 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 5-249 |
| Cow position: | chr17:9086419-9086671 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 5-249 |
| Cow position: | chr17:41715462-41715711 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 118 |
| Conread position: | 5-250 |
| Cow position: | chr17:22463804-22463563 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 6-244 |
| Cow position: | chr17:8639897-8640127 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 7-253 |
| Cow position: | chr17:35251470-35251214 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 11-243 |
| Cow position: | chr17:33985325-33985091 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 11-254 |
| Cow position: | chr17:24004788-24005024 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 12-226 |
| Cow position: | chr17:42585600-42585819 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 12-242 |
| Cow position: | chr17:23783760-23783523 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 14-249 |
| Cow position: | chr17:26655627-26655390 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 23-244 |
| Cow position: | chr17:24594694-24594913 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 26-244 |
| Cow position: | chr17:27713511-27713297 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 118, 72 |
| Conread position: | 30-241 |
| Cow position: | chr17:25545141-25545353 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 33-154 |
| Cow position: | chr17:22470168-22470049 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 33-189 |
| Cow position: | chr17:22835284-22835443 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 66, 143 |
| Conread position: | 43-242 |
| Cow position: | chr17:4298-4096 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 80-248 |
| Cow position: | chr17:1100228-1100061 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 97-244 |
| Cow position: | chr17:13365727-13365581 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.