Cow genome map
| Conread name: | Pig4-TMW8063P09 |
| Conread position: | 1-239 |
| Cow position: | chr18:16071773-16072017 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-242 |
| Cow position: | chr18:14140014-14140246 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 136 |
| Conread position: | 1-250 |
| Cow position: | chr18:10486377-10486619 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 5-238 |
| Cow position: | chr18:27827810-27828046 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 5-240 |
| Cow position: | chr18:8340858-8340619 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 5-242 |
| Cow position: | chr18:8691604-8691360 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 152 |
| Conread position: | 5-242 |
| Cow position: | chr18:16559220-16558975 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 5-242 |
| Cow position: | chr18:52393220-52392976 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 5-243 |
| Cow position: | chr18:4494910-4494671 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 5-243 |
| Cow position: | chr18:24796286-24796530 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 5-243 |
| Cow position: | chr18:49646716-49646471 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 5-244 |
| Cow position: | chr18:52707267-52707025 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 5-244 |
| Cow position: | chr18:55145963-55145720 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 5-246 |
| Cow position: | chr18:4480877-4481120 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 5-250 |
| Cow position: | chr18:39097760-39098004 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 8-231 |
| Cow position: | chr18:37708393-37708163 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 11-225 |
| Cow position: | chr18:43243663-43243884 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 11-228 |
| Cow position: | chr18:21737249-21737026 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 208 |
| Conread position: | 11-239 |
| Cow position: | chr18:17220883-17220636 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 24, 207 |
| Conread position: | 11-239 |
| Cow position: | chr18:17235531-17235284 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 24, 207 |
| Conread position: | 11-241 |
| Cow position: | chr18:2117011-2116776 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 16, 193 |
| Conread position: | 11-242 |
| Cow position: | chr18:17234215-17234456 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 11-243 |
| Cow position: | chr18:52249074-52249309 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 131 |
| Conread position: | 11-246 |
| Cow position: | chr18:47844883-47844641 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 11-256 |
| Cow position: | chr18:21611765-21611502 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 224 |
| Conread position: | 14-249 |
| Cow position: | chr18:37762164-37762408 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 20-248 |
| Cow position: | chr18:4471896-4472128 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 53 |
| Conread position: | 25-185 |
| Cow position: | chr18:31954877-31954716 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 29-242 |
| Cow position: | chr18:2697593-2697803 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 29-244 |
| Cow position: | chr18:52708686-52708894 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 42 |
| Conread position: | 29-265 |
| Cow position: | chr18:11406459-11406707 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 61, 175 |
| Conread position: | 33-244 |
| Cow position: | chr18:54163224-54163014 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 40-242 |
| Cow position: | chr18:30978902-30978698 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 58-240 |
| Cow position: | chr18:48005058-48005240 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 96 |
| Conread position: | 58-242 |
| Cow position: | chr18:14704961-14705133 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 62-247 |
| Cow position: | chr18:36461364-36461548 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 72-257 |
| Cow position: | chr18:1707562-1707378 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 121 |
| Conread position: | 96-245 |
| Cow position: | chr18:26360415-26360558 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 97-242 |
| Cow position: | chr18:21617693-21617551 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.