Cow genome map
| Conread name: | Pig4-TMW8063P09 |
| Conread position: | 1-240 |
| Cow position: | chr2:1092978-1093216 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 1-243 |
| Cow position: | chr2:3713727-3713972 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 1-243 |
| Cow position: | chr2:36660013-36660252 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 1-244 |
| Cow position: | chr2:40449500-40449748 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 192 |
| Conread position: | 1-246 |
| Cow position: | chr2:15339566-15339317 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 1-253 |
| Cow position: | chr2:39548809-39549058 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 2-243 |
| Cow position: | chr2:71461757-71462003 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 4-229 |
| Cow position: | chr2:856661-856434 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 31, 72 |
| Conread position: | 4-242 |
| Cow position: | chr2:35983447-35983209 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 94 |
| Conread position: | 5-161 |
| Cow position: | chr2:38765535-38765687 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 5-223 |
| Cow position: | chr2:69640939-69641150 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 176, 66 |
| Conread position: | 5-224 |
| Cow position: | chr2:19063572-19063789 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 5-238 |
| Cow position: | chr2:19150249-19150483 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 5-243 |
| Cow position: | chr2:42190865-42191109 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 5-243 |
| Cow position: | chr2:46490295-46490051 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 5-244 |
| Cow position: | chr2:376822-377066 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 30, 192 |
| Conread position: | 5-244 |
| Cow position: | chr2:5327840-5327599 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 5-244 |
| Cow position: | chr2:45690260-45690022 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 5-245 |
| Cow position: | chr2:74439311-74439556 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 5-247 |
| Cow position: | chr2:69924206-69924446 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 5-251 |
| Cow position: | chr2:73168734-73168973 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 50 |
| Conread position: | 5-254 |
| Cow position: | chr2:33512362-33512628 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 5-254 |
| Cow position: | chr2:46258363-46258618 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 30, 134 |
| Conread position: | 5-263 |
| Cow position: | chr2:81130030-81129767 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 6-254 |
| Cow position: | chr2:43664115-43664365 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 10-240 |
| Cow position: | chr2:68702608-68702376 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 11-240 |
| Cow position: | chr2:64784330-64784563 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 192 |
| Conread position: | 11-240 |
| Cow position: | chr2:74482238-74482004 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 11-242 |
| Cow position: | chr2:1683102-1683340 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 11-243 |
| Cow position: | chr2:27776889-27776652 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 11-243 |
| Cow position: | chr2:38809331-38809568 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 11-243 |
| Cow position: | chr2:73750964-73750730 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 11-244 |
| Cow position: | chr2:64175075-64174846 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 11-261 |
| Cow position: | chr2:29450592-29450336 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 12-216 |
| Cow position: | chr2:13332238-13332030 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 12-242 |
| Cow position: | chr2:958372-958601 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 87 |
| Conread position: | 12-242 |
| Cow position: | chr2:49862153-49861905 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 201 |
| Conread position: | 12-243 |
| Cow position: | chr2:71465663-71465901 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 12-244 |
| Cow position: | chr2:21755264-21755034 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 12-244 |
| Cow position: | chr2:65334596-65334362 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 13-246 |
| Cow position: | chr2:42264684-42264453 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 75, 56 |
| Conread position: | 14-242 |
| Cow position: | chr2:55407260-55407034 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 20-228 |
| Cow position: | chr2:33219200-33219407 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 21-242 |
| Cow position: | chr2:9509167-9509391 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 24-241 |
| Cow position: | chr2:36951037-36951252 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 29-213 |
| Cow position: | chr2:60310824-60311009 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 89, 164 |
| Conread position: | 29-243 |
| Cow position: | chr2:23646405-23646192 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 75, 80 |
| Conread position: | 29-243 |
| Cow position: | chr2:59163824-59164040 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 190 |
| Conread position: | 29-247 |
| Cow position: | chr2:70279234-70279029 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 30-243 |
| Cow position: | chr2:45113718-45113507 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 35-217 |
| Cow position: | chr2:47916122-47915943 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 94, 23 |
| Conread position: | 35-242 |
| Cow position: | chr2:57995920-57996126 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 87, 8 |
| Conread position: | 43-239 |
| Cow position: | chr2:67381448-67381259 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 48-243 |
| Cow position: | chr2:76616928-76616736 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 61-231 |
| Cow position: | chr2:46448313-46448484 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 66-245 |
| Cow position: | chr2:55391703-55391525 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 69-244 |
| Cow position: | chr2:377827-377653 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 72-248 |
| Cow position: | chr2:46492461-46492287 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 134, 23 |
| Conread position: | 84-239 |
| Cow position: | chr2:74811336-74811493 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 84-243 |
| Cow position: | chr2:66454623-66454464 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 89-243 |
| Cow position: | chr2:46277335-46277183 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 96-232 |
| Cow position: | chr2:66339575-66339442 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 97-243 |
| Cow position: | chr2:18088778-18088631 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 97-247 |
| Cow position: | chr2:77715605-77715756 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 95 |
| Conread position: | 106-244 |
| Cow position: | chr2:52865250-52865387 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.