Cow genome map
| Conread name: | Pig4-TMW8063P09 |
| Conread position: | 1-243 |
| Cow position: | chr6:33323738-33323495 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 132, 107 |
| Conread position: | 1-243 |
| Cow position: | chr6:55972445-55972682 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 1-244 |
| Cow position: | chr6:44757931-44757681 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 1-277 |
| Cow position: | chr6:43603309-43603029 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 153 |
| Conread position: | 2-242 |
| Cow position: | chr6:62583095-62583343 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 5-220 |
| Cow position: | chr6:44232090-44231870 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 5-225 |
| Cow position: | chr6:417862-417639 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 124 |
| Conread position: | 5-231 |
| Cow position: | chr6:61130737-61130964 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-233 |
| Cow position: | chr6:32688085-32687857 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 5-239 |
| Cow position: | chr6:69054027-69053777 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 5-242 |
| Cow position: | chr6:17291662-17291418 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 5-242 |
| Cow position: | chr6:35187585-35187821 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 5-242 |
| Cow position: | chr6:50856090-50855850 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 102, 31 |
| Conread position: | 5-242 |
| Cow position: | chr6:51396135-51395891 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 5-243 |
| Cow position: | chr6:29838686-29838929 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 5-243 |
| Cow position: | chr6:35751413-35751179 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 5-243 |
| Cow position: | chr6:63028884-63029125 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 5-246 |
| Cow position: | chr6:28440717-28440954 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 5-248 |
| Cow position: | chr6:59218757-59219008 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 5-250 |
| Cow position: | chr6:40837018-40836767 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 122 |
| Conread position: | 5-264 |
| Cow position: | chr6:26637912-26637651 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 5-273 |
| Cow position: | chr6:44610137-44610408 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 97 |
| Conread position: | 11-243 |
| Cow position: | chr6:22817790-22817557 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 125, 87 |
| Conread position: | 11-244 |
| Cow position: | chr6:45660130-45659899 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 54, 78 |
| Conread position: | 12-243 |
| Cow position: | chr6:55503244-55503482 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 191 |
| Conread position: | 12-243 |
| Cow position: | chr6:65706406-65706168 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 13-219 |
| Cow position: | chr6:5338533-5338321 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 91 |
| Conread position: | 13-244 |
| Cow position: | chr6:28598536-28598303 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 27-241 |
| Cow position: | chr6:67981558-67981347 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 155, 16 |
| Conread position: | 29-233 |
| Cow position: | chr6:68608876-68608668 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 29-242 |
| Cow position: | chr6:2592764-2592565 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 29-247 |
| Cow position: | chr6:61410026-61409811 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 117 |
| Conread position: | 32-235 |
| Cow position: | chr6:374177-373982 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 34-243 |
| Cow position: | chr6:34101320-34101110 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 45-166 |
| Cow position: | chr6:682083-682204 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-239 |
| Cow position: | chr6:53264803-53264984 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 95-241 |
| Cow position: | chr6:16611676-16611532 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 96-244 |
| Cow position: | chr6:16184352-16184203 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 99-242 |
| Cow position: | chr6:55961017-55961157 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 19 |
Show alignments to all cow chromosomes.