Cow genome map
| Conread name: | Pig4-TMW8063P09 |
| Conread position: | 1-190 |
| Cow position: | chr9:62925413-62925609 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 1-219 |
| Cow position: | chr9:58469709-58469929 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 1-230 |
| Cow position: | chr9:13453604-13453377 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 1-242 |
| Cow position: | chr9:25032643-25032404 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 1-245 |
| Cow position: | chr9:7093957-7094201 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 118, 102 |
| Conread position: | 1-245 |
| Cow position: | chr9:12364221-12363973 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 1-254 |
| Cow position: | chr9:20984033-20984293 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 198 |
| Conread position: | 3-230 |
| Cow position: | chr9:10894447-10894669 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 3-242 |
| Cow position: | chr9:6656100-6655856 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 133 |
| Conread position: | 5-239 |
| Cow position: | chr9:9561930-9561691 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 5-241 |
| Cow position: | chr9:102259-102034 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 130, 45 |
| Conread position: | 5-242 |
| Cow position: | chr9:8204079-8203838 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 5-243 |
| Cow position: | chr9:44560049-44559804 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 5-244 |
| Cow position: | chr9:34315104-34315357 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 5-244 |
| Cow position: | chr9:44718237-44717995 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 5-244 |
| Cow position: | chr9:55033124-55033371 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 30, 195 |
| Conread position: | 7-242 |
| Cow position: | chr9:11418354-11418115 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 11-232 |
| Cow position: | chr9:28281730-28281960 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 12-241 |
| Cow position: | chr9:32609297-32609068 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 12-243 |
| Cow position: | chr9:63411323-63411085 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 19-243 |
| Cow position: | chr9:10772860-10773090 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 20-247 |
| Cow position: | chr9:40477060-40477270 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 23-243 |
| Cow position: | chr9:6594299-6594519 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 102, 75 |
| Conread position: | 29-188 |
| Cow position: | chr9:3873560-3873400 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 29-241 |
| Cow position: | chr9:6317131-6316912 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 29-247 |
| Cow position: | chr9:6163860-6164085 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 29-249 |
| Cow position: | chr9:11315707-11315928 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 34-243 |
| Cow position: | chr9:48610507-48610297 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 35-241 |
| Cow position: | chr9:62635290-62635083 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 97, 71 |
| Conread position: | 40-242 |
| Cow position: | chr9:31644090-31643877 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 163 |
| Conread position: | 43-241 |
| Cow position: | chr9:10896690-10896485 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 53-241 |
| Cow position: | chr9:6721533-6721346 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 61-245 |
| Cow position: | chr9:29667565-29667748 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 64-239 |
| Cow position: | chr9:62568625-62568451 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 90-223 |
| Cow position: | chr9:980470-980338 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 98-254 |
| Cow position: | chr9:28597139-28596985 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 115-241 |
| Cow position: | chr9:44559241-44559118 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.