Cow genome map
| Conread name: | Pig4-TMW8066D01 |
| Conread position: | 4-420 |
| Cow position: | chr11:44581895-44581497 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 5-342 |
| Cow position: | chr11:9224135-9223815 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 64, 129 |
| Conread position: | 7-184 |
| Cow position: | chr11:47728240-47728058 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-193 |
| Cow position: | chr11:11578290-11578092 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 7-193 |
| Cow position: | chr11:32453283-32453474 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-193 |
| Cow position: | chr11:40405601-40405411 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 7-193 |
| Cow position: | chr11:44094170-44093979 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-193 |
| Cow position: | chr11:67451944-67452133 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 62, 132 |
| Conread position: | 7-208 |
| Cow position: | chr11:3494441-3494648 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 132 |
| Conread position: | 7-215 |
| Cow position: | chr11:12951672-12951460 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 62, 203 |
| Conread position: | 7-248 |
| Cow position: | chr11:44155549-44155308 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 7-348 |
| Cow position: | chr11:72309588-72309262 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 7-368 |
| Cow position: | chr11:1488726-1488385 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 131 |
| Conread position: | 7-425 |
| Cow position: | chr11:27726468-27726066 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-425 |
| Cow position: | chr11:61399653-61399250 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-453 |
| Cow position: | chr11:86876432-86876003 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 144 |
| Conread position: | 7-463 |
| Cow position: | chr11:67155129-67155561 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 7-501 |
| Cow position: | chr11:67845120-67844638 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-505 |
| Cow position: | chr11:52436300-52436803 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-529 |
| Cow position: | chr11:44042159-44042679 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 7-543 |
| Cow position: | chr11:50836216-50835688 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 190 |
| Conread position: | 7-700 |
| Cow position: | chr11:4033958-4033264 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 196 |
| Conread position: | 7-701 |
| Cow position: | chr11:4054885-4054165 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 146 |
| Conread position: | 7-701 |
| Cow position: | chr11:8264967-8265653 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 7-701 |
| Cow position: | chr11:9733231-9732542 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 186 |
| Conread position: | 7-701 |
| Cow position: | chr11:12356950-12356262 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-701 |
| Cow position: | chr11:15986694-15987389 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 7-701 |
| Cow position: | chr11:19062625-19061942 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr11:29667143-29666455 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 187 |
| Conread position: | 7-701 |
| Cow position: | chr11:32079336-32078647 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 7-701 |
| Cow position: | chr11:53430581-53429889 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 187 |
| Conread position: | 7-701 |
| Cow position: | chr11:85392382-85391691 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 7-711 |
| Cow position: | chr11:10957267-10957963 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 52 |
| Conread position: | 7-711 |
| Cow position: | chr11:73134748-73135447 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-731 |
| Cow position: | chr11:11590418-11591130 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 122 |
| Conread position: | 7-743 |
| Cow position: | chr11:47738096-47737363 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-746 |
| Cow position: | chr11:32479367-32478631 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 8-149 |
| Cow position: | chr11:84965626-84965773 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-746 |
| Cow position: | chr11:20732781-20732041 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 186 |
| Conread position: | 10-722 |
| Cow position: | chr11:26784704-26785404 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 186 |
| Conread position: | 12-368 |
| Cow position: | chr11:4062421-4062086 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 58, 80 |
| Conread position: | 13-695 |
| Cow position: | chr11:85732587-85731900 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 192 |
| Conread position: | 14-701 |
| Cow position: | chr11:7117869-7118546 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 26-171 |
| Cow position: | chr11:27936680-27936830 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 32-705 |
| Cow position: | chr11:41169230-41168558 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 163 |
| Conread position: | 236-674 |
| Cow position: | chr11:40774366-40773910 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 13 |
| Conread position: | 265-703 |
| Cow position: | chr11:30121959-30121511 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 220 |
| Conread position: | 374-695 |
| Cow position: | chr11:59627544-59627206 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 80, 121 |
| Conread position: | 456-693 |
| Cow position: | chr11:15994053-15994291 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 469-703 |
| Cow position: | chr11:12095686-12095929 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 489-691 |
| Cow position: | chr11:37280770-37280558 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 491-701 |
| Cow position: | chr11:67155552-67155769 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 725-858 |
| Cow position: | chr11:44581895-44581756 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 728-857 |
| Cow position: | chr11:19062625-19062491 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-857 |
| Cow position: | chr11:52436300-52436434 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:1488726-1488592 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:3494441-3494576 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:12356950-12356815 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:15986694-15986829 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:27726468-27726333 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:29667143-29667008 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:32079336-32079198 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:32453283-32453418 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:40405601-40405467 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:44042159-44042294 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:44094170-44094035 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:47728240-47728105 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:47738096-47737961 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:50836216-50836081 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:61399653-61399517 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:67155129-67155263 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 728-858 |
| Cow position: | chr11:67451944-67452079 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:67845120-67844985 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:73134748-73134883 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:85392382-85392247 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 728-858 |
| Cow position: | chr11:86876432-86876297 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 729-858 |
| Cow position: | chr11:20732781-20732647 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 729-858 |
| Cow position: | chr11:84965626-84965760 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.