Cow genome map
| Conread name: | Pig4-TMW8066D01 |
| Conread position: | 3-731 |
| Cow position: | chr15:33122768-33123496 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 190 |
| Conread position: | 4-175 |
| Cow position: | chr15:13389935-13389764 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 143 |
| Conread position: | 5-188 |
| Cow position: | chr15:24795208-24795398 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 7-179 |
| Cow position: | chr15:41659560-41659737 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-188 |
| Cow position: | chr15:20411988-20412174 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-188 |
| Cow position: | chr15:32719288-32719099 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-193 |
| Cow position: | chr15:2588055-2587856 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 7-193 |
| Cow position: | chr15:8810925-8810734 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-193 |
| Cow position: | chr15:18331441-18331254 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 7-328 |
| Cow position: | chr15:7838661-7838966 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-356 |
| Cow position: | chr15:6561979-6562310 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-388 |
| Cow position: | chr15:107393-107758 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-420 |
| Cow position: | chr15:3259929-3259534 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 7-453 |
| Cow position: | chr15:37393071-37393495 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 119 |
| Conread position: | 7-514 |
| Cow position: | chr15:3890296-3890785 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 188 |
| Conread position: | 7-610 |
| Cow position: | chr15:4080843-4080239 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 132 |
| Conread position: | 7-647 |
| Cow position: | chr15:35646291-35645669 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 139 |
| Conread position: | 7-696 |
| Cow position: | chr15:7564390-7565082 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-696 |
| Cow position: | chr15:21664350-21663666 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-701 |
| Cow position: | chr15:2078041-2078716 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 7-701 |
| Cow position: | chr15:2646261-2645564 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 191 |
| Conread position: | 7-701 |
| Cow position: | chr15:4947897-4948587 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 7-701 |
| Cow position: | chr15:7546265-7546963 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr15:18266373-18265680 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 193 |
| Conread position: | 7-701 |
| Cow position: | chr15:25205614-25204924 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 128 |
| Conread position: | 7-701 |
| Cow position: | chr15:42319423-42318719 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 287 |
| Conread position: | 7-708 |
| Cow position: | chr15:8100843-8101545 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 7-725 |
| Cow position: | chr15:12364819-12365515 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 171 |
| Conread position: | 7-731 |
| Cow position: | chr15:59044-59765 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 187 |
| Conread position: | 7-743 |
| Cow position: | chr15:4387149-4387882 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 7-743 |
| Cow position: | chr15:16190379-16189641 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-743 |
| Cow position: | chr15:53339615-53340342 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 117 |
| Conread position: | 7-746 |
| Cow position: | chr15:50148724-50149453 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-748 |
| Cow position: | chr15:2900868-2900118 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 194 |
| Conread position: | 8-188 |
| Cow position: | chr15:1657606-1657425 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 8-703 |
| Cow position: | chr15:38982056-38982736 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 186 |
| Conread position: | 12-694 |
| Cow position: | chr15:6552383-6551686 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 121 |
| Conread position: | 13-687 |
| Cow position: | chr15:21451093-21451767 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 54 |
| Conread position: | 23-498 |
| Cow position: | chr15:4860588-4861047 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 116 |
| Conread position: | 107-678 |
| Cow position: | chr15:12387322-12387879 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 381 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 345, 18 |
| Conread position: | 234-701 |
| Cow position: | chr15:5496655-5497138 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 265 |
| Conread position: | 278-711 |
| Cow position: | chr15:8752543-8752991 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 149 |
| Conread position: | 324-701 |
| Cow position: | chr15:6119113-6119495 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 166 |
| Conread position: | 339-748 |
| Cow position: | chr15:4672950-4673378 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 38 |
| Conread position: | 451-700 |
| Cow position: | chr15:2807050-2806795 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 453-743 |
| Cow position: | chr15:10825298-10825598 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 80, 33 |
| Conread position: | 470-701 |
| Cow position: | chr15:6590309-6590073 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 724-858 |
| Cow position: | chr15:33122768-33122907 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 726-858 |
| Cow position: | chr15:24795208-24795344 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 728-854 |
| Cow position: | chr15:2646261-2646130 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-856 |
| Cow position: | chr15:18331441-18331311 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:107393-107528 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:3890296-3890431 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:4947897-4948031 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 728-858 |
| Cow position: | chr15:6561979-6562114 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:7546265-7546400 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:7564390-7564525 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:7838661-7838796 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:8810925-8810790 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:18266373-18266238 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:20411988-20412123 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:25205614-25205478 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:35646291-35646156 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:41659560-41659695 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr15:50148724-50148859 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.