Cow genome map
| Conread name: | Pig4-TMW8066D01 |
| Conread position: | 7-128 |
| Cow position: | chr17:3640281-3640155 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-139 |
| Cow position: | chr17:20414836-20414699 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-184 |
| Cow position: | chr17:17257066-17256884 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 149 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-188 |
| Cow position: | chr17:33284068-33283880 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-193 |
| Cow position: | chr17:9751330-9751518 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 63, 105 |
| Conread position: | 7-205 |
| Cow position: | chr17:44865640-44865833 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-341 |
| Cow position: | chr17:4783188-4782875 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 126 |
| Conread position: | 7-360 |
| Cow position: | chr17:14936350-14936015 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 187 |
| Conread position: | 7-402 |
| Cow position: | chr17:39049841-39050214 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-425 |
| Cow position: | chr17:183195-183594 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-431 |
| Cow position: | chr17:20232354-20232766 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 7-432 |
| Cow position: | chr17:40064-40473 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-444 |
| Cow position: | chr17:2246462-2246044 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 7-467 |
| Cow position: | chr17:45271495-45271050 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-497 |
| Cow position: | chr17:34159350-34159830 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 7-660 |
| Cow position: | chr17:20489928-20490580 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 139 |
| Conread position: | 7-680 |
| Cow position: | chr17:20080272-20079602 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 121 |
| Conread position: | 7-687 |
| Cow position: | chr17:15852317-15852992 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-687 |
| Cow position: | chr17:22561520-22562192 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 7-696 |
| Cow position: | chr17:23322824-23322130 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-701 |
| Cow position: | chr17:136252-136941 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 7-701 |
| Cow position: | chr17:6261483-6262162 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 113 |
| Conread position: | 7-701 |
| Cow position: | chr17:14215424-14214735 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 195 |
| Conread position: | 7-701 |
| Cow position: | chr17:15437408-15438097 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr17:28026883-28026189 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-703 |
| Cow position: | chr17:11784491-11785194 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-711 |
| Cow position: | chr17:8210265-8210963 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-711 |
| Cow position: | chr17:27793159-27792471 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 131 |
| Conread position: | 7-711 |
| Cow position: | chr17:43990126-43990814 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 117 |
| Conread position: | 7-725 |
| Cow position: | chr17:34574367-34575085 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-743 |
| Cow position: | chr17:2263763-2264533 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 498 |
| Conread position: | 7-743 |
| Cow position: | chr17:15326905-15327631 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 118 |
| Conread position: | 7-746 |
| Cow position: | chr17:2554651-2553910 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 187 |
| Conread position: | 8-193 |
| Cow position: | chr17:4061735-4061926 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-193 |
| Cow position: | chr17:4083638-4083819 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 65, 90 |
| Conread position: | 8-730 |
| Cow position: | chr17:1881891-1882600 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 14-158 |
| Cow position: | chr17:53444-53295 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 93-703 |
| Cow position: | chr17:18125225-18124635 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 75 |
| Conread position: | 397-719 |
| Cow position: | chr17:1570401-1570069 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 92 |
| Conread position: | 728-849 |
| Cow position: | chr17:3640281-3640155 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-856 |
| Cow position: | chr17:14215424-14215291 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:40064-40199 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:183195-183330 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:2263763-2263898 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:8210265-8210400 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:11784491-11784626 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:14936350-14936215 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:15437408-15437543 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:15852317-15852452 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:17257066-17256931 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:20080272-20080140 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 119 |
| Conread position: | 728-858 |
| Cow position: | chr17:20414836-20414701 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:23322824-23322689 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:33284068-33283933 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:34574367-34574502 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr17:39049841-39049976 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 735-856 |
| Cow position: | chr17:53444-53318 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.