Cow genome map

Conread name: Pig4-TMW8066D01

Conread position: 4-193
Cow position: chr2:49303019-49302815 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 4-206
Cow position: chr2:49632023-49632232 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 65, 164

Conread position: 5-719
Cow position: chr2:32457782-32457080 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 113

Conread position: 6-711
Cow position: chr2:59412439-59411763 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 54

Conread position: 7-144
Cow position: chr2:13044428-13044286 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 7-186
Cow position: chr2:52617755-52617939 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 153
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 0

Conread position: 7-186
Cow position: chr2:56889017-56889201 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 178

Conread position: 7-193
Cow position: chr2:281406-281215 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr2:14209543-14209352 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 158
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr2:32640224-32640412 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 152
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 7-193
Cow position: chr2:39422903-39423094 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr2:80291483-80291297 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 62, 117

Conread position: 7-217
Cow position: chr2:11157841-11157626 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 62, 0

Conread position: 7-327
Cow position: chr2:975401-975100 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 62, 100

Conread position: 7-372
Cow position: chr2:11559129-11559478 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-404
Cow position: chr2:4401871-4401489 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-420
Cow position: chr2:6962791-6963190 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 131

Conread position: 7-424
Cow position: chr2:8085274-8085676 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-464
Cow position: chr2:12696189-12695746 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 189

Conread position: 7-491
Cow position: chr2:46048957-46048488 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-534
Cow position: chr2:10610365-10609847 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 189

Conread position: 7-597
Cow position: chr2:32656914-32657491 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 137

Conread position: 7-610
Cow position: chr2:41688047-41688649 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 170

Conread position: 7-618
Cow position: chr2:39117902-39118496 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 96

Conread position: 7-688
Cow position: chr2:47037152-47036473 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-693
Cow position: chr2:9957793-9957107 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-696
Cow position: chr2:81258456-81259138 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 188

Conread position: 7-701
Cow position: chr2:363788-363098 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 188

Conread position: 7-701
Cow position: chr2:9188766-9188096 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 114

Conread position: 7-701
Cow position: chr2:24926694-24927380 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-701
Cow position: chr2:26904493-26903811 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 185

Conread position: 7-701
Cow position: chr2:28648329-28647651 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-701
Cow position: chr2:32863321-32862655 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 81

Conread position: 7-701
Cow position: chr2:45938422-45937746 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 179

Conread position: 7-708
Cow position: chr2:2086889-2086184 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 132

Conread position: 7-708
Cow position: chr2:10731581-10730901 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 100

Conread position: 7-711
Cow position: chr2:54738766-54739464 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 117

Conread position: 7-711
Cow position: chr2:72688887-72689579 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 189

Conread position: 7-725
Cow position: chr2:26922707-26923418 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 151

Conread position: 7-743
Cow position: chr2:780127-779408 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 116

Conread position: 7-743
Cow position: chr2:6005569-6004821 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 186

Conread position: 7-743
Cow position: chr2:65936948-65936210 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-746
Cow position: chr2:12222998-12222265 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 7-746
Cow position: chr2:44092639-44093383 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 132

Conread position: 8-193
Cow position: chr2:41047748-41047558 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 0

Conread position: 9-425
Cow position: chr2:6880640-6881056 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 99

Conread position: 10-206
Cow position: chr2:246607-246408 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 92

Conread position: 20-701
Cow position: chr2:14824325-14824981 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 133-682
Cow position: chr2:3838713-3839232 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 57

Conread position: 178-757
Cow position: chr2:8747727-8747120 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 27

Conread position: 229-692
Cow position: chr2:34489947-34490403 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 78

Conread position: 229-701
Cow position: chr2:28639399-28638923 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 121

Conread position: 310-701
Cow position: chr2:72792004-72791607 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 187

Conread position: 373-700
Cow position: chr2:16305726-16306053 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 73

Conread position: 453-691
Cow position: chr2:66596746-66596994 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 34

Conread position: 453-696
Cow position: chr2:6964367-6964628 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 33

Conread position: 453-701
Cow position: chr2:36048552-36048296 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 33

Conread position: 454-679
Cow position: chr2:8347973-8347748 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 18

Conread position: 459-659
Cow position: chr2:41952520-41952729 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 74, 21

Conread position: 511-738
Cow position: chr2:28652344-28652108 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 193

Conread position: 725-858
Cow position: chr2:49303019-49302881 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 727-858
Cow position: chr2:59412439-59412313 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 728-835
Cow position: chr2:9188766-9188654 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:281406-281271 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:363788-363653 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:6005569-6005434 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 728-858
Cow position: chr2:6962791-6962926 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:8085274-8085409 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:9957793-9957658 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:11157841-11157706 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:11559129-11559264 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:12222998-12222863 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:13044428-13044293 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:24926694-24926829 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:26904493-26904361 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 728-858
Cow position: chr2:26922707-26922842 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:28648329-28648194 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:32640224-32640355 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 728-858
Cow position: chr2:39422903-39423038 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:41688047-41688182 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:44092639-44092774 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:46048957-46048822 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:47037152-47037017 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:52617755-52617890 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:65936948-65936813 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr2:72688887-72689022 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 729-858
Cow position: chr2:41047748-41047614 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.