Cow genome map
| Conread name: | Pig4-TMW8066D01 |
| Conread position: | 4-206 |
| Cow position: | chr28:10495720-10495512 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 50, 154 |
| Conread position: | 7-154 |
| Cow position: | chr28:18302122-18301972 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 7-159 |
| Cow position: | chr28:9288731-9288887 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 7-188 |
| Cow position: | chr28:32790615-32790428 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-193 |
| Cow position: | chr28:5567935-5568127 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 7-193 |
| Cow position: | chr28:15998887-15999078 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-193 |
| Cow position: | chr28:31591343-31591532 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 7-205 |
| Cow position: | chr28:24669381-24669583 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 120 |
| Conread position: | 7-437 |
| Cow position: | chr28:483810-483396 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 186 |
| Conread position: | 7-496 |
| Cow position: | chr28:14703599-14703123 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 186 |
| Conread position: | 7-504 |
| Cow position: | chr28:17630883-17631366 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-653 |
| Cow position: | chr28:1459879-1460523 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-682 |
| Cow position: | chr28:21361275-21361946 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 132 |
| Conread position: | 7-693 |
| Cow position: | chr28:27957934-27957268 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 7-701 |
| Cow position: | chr28:1166109-1165421 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 7-701 |
| Cow position: | chr28:1955139-1955834 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 190 |
| Conread position: | 7-701 |
| Cow position: | chr28:3190468-3189778 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 180 |
| Conread position: | 7-701 |
| Cow position: | chr28:8719177-8718509 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 115 |
| Conread position: | 7-701 |
| Cow position: | chr28:10471436-10472118 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 133 |
| Conread position: | 7-701 |
| Cow position: | chr28:12408439-12407751 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 7-701 |
| Cow position: | chr28:13461744-13462426 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 7-701 |
| Cow position: | chr28:17665543-17664860 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 132 |
| Conread position: | 7-701 |
| Cow position: | chr28:26424477-26423799 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 187 |
| Conread position: | 7-703 |
| Cow position: | chr28:1506650-1507340 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 95 |
| Conread position: | 7-704 |
| Cow position: | chr28:7003784-7004475 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 7-711 |
| Cow position: | chr28:24590640-24591346 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 132 |
| Conread position: | 7-725 |
| Cow position: | chr28:23311524-23310826 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 7-729 |
| Cow position: | chr28:7058884-7058157 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 8-747 |
| Cow position: | chr28:11504456-11503710 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 185 |
| Conread position: | 13-671 |
| Cow position: | chr28:10293249-10293902 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 21-701 |
| Cow position: | chr28:21378323-21378999 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 174 |
| Conread position: | 26-701 |
| Cow position: | chr28:6537000-6536332 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 113 |
| Conread position: | 27-675 |
| Cow position: | chr28:2121257-2121900 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 112-693 |
| Cow position: | chr28:3014081-3013511 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 344-719 |
| Cow position: | chr28:1385337-1384952 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 149 |
| Conread position: | 362-719 |
| Cow position: | chr28:34084393-34084037 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 123 |
| Conread position: | 721-854 |
| Cow position: | chr28:13461737-13461875 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 725-858 |
| Cow position: | chr28:10495720-10495582 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 728-857 |
| Cow position: | chr28:7003784-7003917 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 728-857 |
| Cow position: | chr28:21361275-21361410 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:483810-483675 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:1459879-1460014 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:1955139-1955274 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:3190468-3190333 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:7058884-7058749 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:9288731-9288866 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:10471436-10471571 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:12408439-12408304 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:14703599-14703465 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:15998887-15999022 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:17630883-17631018 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:17665543-17665408 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:18302122-18301989 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:24590640-24590775 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:26424477-26424342 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 728-858 |
| Cow position: | chr28:31591343-31591476 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 728-858 |
| Cow position: | chr28:32790615-32790480 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 747-858 |
| Cow position: | chr28:6537000-6536884 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.