Cow genome map
| Conread name: | Pig4-TMW8066D01 |
| Conread position: | 4-202 |
| Cow position: | chr29:19954351-19954549 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 4-719 |
| Cow position: | chr29:2746698-2746001 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 7-148 |
| Cow position: | chr29:27180005-27179859 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-186 |
| Cow position: | chr29:16024311-16024495 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 62, 178 |
| Conread position: | 7-188 |
| Cow position: | chr29:32641987-32642168 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 111 |
| Conread position: | 7-203 |
| Cow position: | chr29:27812831-27813035 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 191 |
| Conread position: | 7-206 |
| Cow position: | chr29:8665257-8665457 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 59, 115 |
| Conread position: | 7-206 |
| Cow position: | chr29:22951427-22951221 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 7-335 |
| Cow position: | chr29:43965975-43965623 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-402 |
| Cow position: | chr29:38228725-38229107 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 185 |
| Conread position: | 7-425 |
| Cow position: | chr29:13622110-13621708 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-555 |
| Cow position: | chr29:38206916-38206377 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 7-649 |
| Cow position: | chr29:31122576-31123218 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 189 |
| Conread position: | 7-695 |
| Cow position: | chr29:31183150-31183836 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-695 |
| Cow position: | chr29:43325265-43325943 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 184 |
| Conread position: | 7-696 |
| Cow position: | chr29:32558003-32557316 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 7-701 |
| Cow position: | chr29:409514-408825 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 7-701 |
| Cow position: | chr29:608900-608195 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr29:6264251-6263567 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 7-701 |
| Cow position: | chr29:7846138-7846828 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr29:8625447-8624759 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 190 |
| Conread position: | 7-701 |
| Cow position: | chr29:10022584-10021892 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr29:10822170-10821483 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 185 |
| Conread position: | 7-701 |
| Cow position: | chr29:17406872-17407572 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 187 |
| Conread position: | 7-701 |
| Cow position: | chr29:19526538-19525856 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr29:20252920-20253600 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 7-703 |
| Cow position: | chr29:2465128-2464434 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 7-703 |
| Cow position: | chr29:13018438-13019129 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 187 |
| Conread position: | 7-726 |
| Cow position: | chr29:5980966-5980263 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 135 |
| Conread position: | 7-743 |
| Cow position: | chr29:46713-45980 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 186 |
| Conread position: | 7-743 |
| Cow position: | chr29:26163088-26162357 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 8-376 |
| Cow position: | chr29:45625139-45625485 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 60, 100 |
| Conread position: | 8-430 |
| Cow position: | chr29:6214234-6214640 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 187 |
| Conread position: | 8-743 |
| Cow position: | chr29:16172359-16171629 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 9-150 |
| Cow position: | chr29:14587674-14587820 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 9-748 |
| Cow position: | chr29:9962183-9962889 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 486 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 19-743 |
| Cow position: | chr29:2839581-2838857 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 175 |
| Conread position: | 20-701 |
| Cow position: | chr29:32038590-32039245 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 32-345 |
| Cow position: | chr29:5959611-5959910 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 142 |
| Conread position: | 37-696 |
| Cow position: | chr29:16345978-16346635 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 149 |
| Conread position: | 232-690 |
| Cow position: | chr29:13056702-13057173 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 84 |
| Conread position: | 240-693 |
| Cow position: | chr29:13850924-13850448 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 161 |
| Conread position: | 465-702 |
| Cow position: | chr29:10249479-10249243 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 481-701 |
| Cow position: | chr29:42805932-42806159 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 584-711 |
| Cow position: | chr29:32807194-32807066 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 728-858 |
| Cow position: | chr29:409514-409379 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:608900-608765 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:5980966-5980828 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:7846138-7846273 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:8665257-8665386 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 115 |
| Conread position: | 728-858 |
| Cow position: | chr29:10022584-10022449 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:10822170-10822038 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:13622110-13621975 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:17406872-17407007 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:19526538-19526403 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:26163088-26162953 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:27180005-27179870 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:31183150-31183285 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:38228725-38228858 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr29:43325265-43325397 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 730-858 |
| Cow position: | chr29:14587674-14587807 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.