Cow genome map
| Conread name: | Pig4-TMW8066D01 | 
| Conread position: | 2-453 | 
| Cow position: | chr3:48228659-48228254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 67 | 
| Conread position: | 4-122 | 
| Cow position: | chr3:31416854-31416977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 4-164 | 
| Cow position: | chr3:21002127-21002294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 4-372 | 
| Cow position: | chr3:56295846-56296197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 189 | 
| Conread position: | 6-721 | 
| Cow position: | chr3:64813754-64813080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 728 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 10 | 
| Conread position: | 7-138 | 
| Cow position: | chr3:51857027-51856891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-148 | 
| Cow position: | chr3:2919128-2919274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 7-158 | 
| Cow position: | chr3:15188473-15188632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-162 | 
| Cow position: | chr3:1029082-1029242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-175 | 
| Cow position: | chr3:50125909-50125736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-188 | 
| Cow position: | chr3:23288670-23288490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 65, 108 | 
| Conread position: | 7-188 | 
| Cow position: | chr3:30617260-30617078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 62, 44 | 
| Conread position: | 7-193 | 
| Cow position: | chr3:5952523-5952335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 7-193 | 
| Cow position: | chr3:13725121-13724929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-193 | 
| Cow position: | chr3:16224549-16224747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 7-193 | 
| Cow position: | chr3:19888997-19888810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 62, 121 | 
| Conread position: | 7-193 | 
| Cow position: | chr3:43191628-43191437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-193 | 
| Cow position: | chr3:57483062-57482870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-203 | 
| Cow position: | chr3:54786931-54787129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 66, 122 | 
| Conread position: | 7-205 | 
| Cow position: | chr3:72388788-72388600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 66, 95 | 
| Conread position: | 7-355 | 
| Cow position: | chr3:27920070-27920392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-357 | 
| Cow position: | chr3:7248196-7248530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 132 | 
| Conread position: | 7-383 | 
| Cow position: | chr3:30316211-30316572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 188 | 
| Conread position: | 7-384 | 
| Cow position: | chr3:58784492-58784131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-406 | 
| Cow position: | chr3:44925727-44926109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-425 | 
| Cow position: | chr3:19880308-19880709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 115 | 
| Conread position: | 7-427 | 
| Cow position: | chr3:74059189-74059592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-453 | 
| Cow position: | chr3:64652272-64652700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 95 | 
| Conread position: | 7-582 | 
| Cow position: | chr3:29190412-29189848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 188 | 
| Conread position: | 7-693 | 
| Cow position: | chr3:49543548-49542867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 704 | 
| Alignm identity: | 535 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 187 | 
| Conread position: | 7-695 | 
| Cow position: | chr3:23206212-23205536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 711 | 
| Alignm identity: | 518 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 187 | 
| Conread position: | 7-695 | 
| Cow position: | chr3:29575460-29574778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 711 | 
| Alignm identity: | 524 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 189 | 
| Conread position: | 7-696 | 
| Cow position: | chr3:40338484-40337796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 711 | 
| Alignm identity: | 538 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-699 | 
| Cow position: | chr3:30330479-30329786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 717 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-700 | 
| Cow position: | chr3:27864835-27865523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 712 | 
| Alignm identity: | 542 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 186 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:18114030-18113339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 717 | 
| Alignm identity: | 551 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 132 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:18861085-18861790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 731 | 
| Alignm identity: | 538 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:34505689-34504999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 715 | 
| Alignm identity: | 542 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:41081829-41082519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 715 | 
| Alignm identity: | 547 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:64026474-64025783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 716 | 
| Alignm identity: | 544 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:68698311-68697620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 718 | 
| Alignm identity: | 534 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:68872091-68871402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 716 | 
| Alignm identity: | 536 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 187 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:68890913-68890224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 716 | 
| Alignm identity: | 541 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-701 | 
| Cow position: | chr3:69932170-69931486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 716 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 95 | 
| Conread position: | 7-703 | 
| Cow position: | chr3:42448770-42449456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 716 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 47 | 
| Conread position: | 7-703 | 
| Cow position: | chr3:46504213-46504918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 715 | 
| Alignm identity: | 536 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 188 | 
| Conread position: | 7-711 | 
| Cow position: | chr3:32621378-32620684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 726 | 
| Alignm identity: | 551 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 83 | 
| Conread position: | 7-712 | 
| Cow position: | chr3:49135901-49135200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 728 | 
| Alignm identity: | 525 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 163 | 
| Conread position: | 7-715 | 
| Cow position: | chr3:29329626-29328921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 730 | 
| Alignm identity: | 549 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 7-715 | 
| Cow position: | chr3:66621859-66622577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 743 | 
| Alignm identity: | 532 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 219 | 
| Conread position: | 7-719 | 
| Cow position: | chr3:19945914-19946609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 729 | 
| Alignm identity: | 536 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 25 | 
| Conread position: | 7-723 | 
| Cow position: | chr3:21181034-21180327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 736 | 
| Alignm identity: | 533 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 175 | 
| Conread position: | 7-743 | 
| Cow position: | chr3:36862794-36862061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 758 | 
| Alignm identity: | 567 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 187 | 
| Conread position: | 7-748 | 
| Cow position: | chr3:19755300-19754563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 764 | 
| Alignm identity: | 558 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 188 | 
| Conread position: | 7-748 | 
| Cow position: | chr3:48844658-48845401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 767 | 
| Alignm identity: | 568 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 186 | 
| Conread position: | 8-193 | 
| Cow position: | chr3:38868256-38868446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 9-205 | 
| Cow position: | chr3:50903941-50904136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 188, 131 | 
| Conread position: | 12-701 | 
| Cow position: | chr3:77425372-77426052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 719 | 
| Alignm identity: | 533 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 182 | 
| Conread position: | 15-645 | 
| Cow position: | chr3:2853730-2853101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 39 | 
| Conread position: | 19-518 | 
| Cow position: | chr3:33634914-33635403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 175 | 
| Conread position: | 20-701 | 
| Cow position: | chr3:56398922-56399594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 710 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 174 | 
| Conread position: | 21-200 | 
| Cow position: | chr3:15054032-15053850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 48, 173 | 
| Conread position: | 38-191 | 
| Cow position: | chr3:58949197-58949350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 214-701 | 
| Cow position: | chr3:46751484-46751976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 197, 51 | 
| Conread position: | 234-701 | 
| Cow position: | chr3:57741387-57741874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 269 | 
| Conread position: | 235-719 | 
| Cow position: | chr3:15053839-15053346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 18 | 
| Conread position: | 270-701 | 
| Cow position: | chr3:18462204-18461769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 44 | 
| Conread position: | 317-701 | 
| Cow position: | chr3:35886390-35885995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 46 | 
| Conread position: | 370-701 | 
| Cow position: | chr3:55729052-55729394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 122 | 
| Conread position: | 494-701 | 
| Cow position: | chr3:34014472-34014689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 39, 212 | 
| Conread position: | 725-843 | 
| Cow position: | chr3:31416854-31416977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 725-858 | 
| Cow position: | chr3:56295846-56295984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 728-857 | 
| Cow position: | chr3:29190412-29190277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:1029082-1029217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:2919128-2919263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:13725121-13724986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:18114030-18113895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:18861085-18861220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:19755300-19755165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:19880308-19880442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 62, 115 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:21181034-21180898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:27920070-27920205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:29329626-29329491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:30316211-30316346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:32621378-32621246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 62, 83 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:34505689-34505554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:40338484-40338349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:41081829-41081964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:42448770-42448904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 63, 47 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:43191628-43191493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:44925727-44925862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:46504213-46504348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:48844658-48844793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:49135901-49135766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:49543548-49543413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:50125909-50125774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:57483062-57482927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:58784492-58784357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:64026474-64026339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:64652272-64652404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 62, 95 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:68890913-68890778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:72388788-72388657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 66, 95 | 
| Conread position: | 728-858 | 
| Cow position: | chr3:74059189-74059324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 729-854 | 
| Cow position: | chr3:38868256-38868386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 733-857 | 
| Cow position: | chr3:77425372-77425501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 736-858 | 
| Cow position: | chr3:2853730-2853604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 54, 39 | 
| Conread position: | 742-858 | 
| Cow position: | chr3:15054032-15053912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 48, 0 | 
Show alignments to all cow chromosomes.
