Cow genome map

Conread name: Pig4-TMW8066D01

Conread position: 4-693
Cow position: chr4:60649912-60650586 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 152

Conread position: 4-701
Cow position: chr4:67682662-67683349 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 191

Conread position: 5-742
Cow position: chr4:11109608-11108873 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 27

Conread position: 6-177
Cow position: chr4:20235932-20235750 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 6-349
Cow position: chr4:7730987-7730660 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 187

Conread position: 6-351
Cow position: chr4:18338319-18338648 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 187

Conread position: 6-515
Cow position: chr4:20241985-20242480 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 194

Conread position: 7-188
Cow position: chr4:357372-357557 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 62, 172

Conread position: 7-191
Cow position: chr4:9846477-9846285 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 7-193
Cow position: chr4:827675-827866 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr4:1048797-1048605 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 158
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr4:3356467-3356276 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr4:5881622-5881821 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr4:6267724-6267534 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 62, 44

Conread position: 7-193
Cow position: chr4:17092397-17092209 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 47

Conread position: 7-193
Cow position: chr4:36897840-36898031 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 0

Conread position: 7-193
Cow position: chr4:43318169-43317978 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 7-329
Cow position: chr4:6865041-6864735 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-346
Cow position: chr4:98746-98423 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-377
Cow position: chr4:18423055-18422704 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 118

Conread position: 7-393
Cow position: chr4:17501864-17501494 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-420
Cow position: chr4:65222293-65221893 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-482
Cow position: chr4:5443358-5442893 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-501
Cow position: chr4:46666376-46666854 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 132

Conread position: 7-505
Cow position: chr4:530885-531380 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-530
Cow position: chr4:27655117-27654609 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-591
Cow position: chr4:1952100-1951519 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 7-591
Cow position: chr4:14387289-14387858 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 67

Conread position: 7-621
Cow position: chr4:15460798-15460193 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-680
Cow position: chr4:28833181-28833860 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 198

Conread position: 7-687
Cow position: chr4:13494799-13495464 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 98

Conread position: 7-689
Cow position: chr4:16361662-16362347 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 188

Conread position: 7-693
Cow position: chr4:12239767-12239096 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 116

Conread position: 7-696
Cow position: chr4:25598019-25597337 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-696
Cow position: chr4:30472680-30473363 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-696
Cow position: chr4:57985458-57986168 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 117

Conread position: 7-701
Cow position: chr4:32213639-32214328 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 186

Conread position: 7-701
Cow position: chr4:33022172-33021474 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-701
Cow position: chr4:33495022-33495714 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 188

Conread position: 7-701
Cow position: chr4:41956230-41956919 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 188

Conread position: 7-701
Cow position: chr4:41960366-41961055 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-708
Cow position: chr4:3127277-3127981 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-711
Cow position: chr4:160624-161330 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-711
Cow position: chr4:16060746-16061444 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 163

Conread position: 7-725
Cow position: chr4:19262793-19263492 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 99

Conread position: 8-701
Cow position: chr4:605094-605776 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 112

Conread position: 8-703
Cow position: chr4:54970931-54971599 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 116

Conread position: 8-711
Cow position: chr4:6567847-6568542 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 186

Conread position: 9-419
Cow position: chr4:28653026-28652631 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 184

Conread position: 9-701
Cow position: chr4:10883006-10883693 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 185

Conread position: 132-700
Cow position: chr4:36897949-36898533 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 229-693
Cow position: chr4:67467670-67468133 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 70

Conread position: 229-701
Cow position: chr4:357562-358036 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 23

Conread position: 316-693
Cow position: chr4:28175320-28174934 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 34

Conread position: 370-696
Cow position: chr4:34385719-34385410 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 85

Conread position: 453-623
Cow position: chr4:17044382-17044211 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 33

Conread position: 725-858
Cow position: chr4:67682662-67682800 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 727-858
Cow position: chr4:7730987-7730851 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 727-858
Cow position: chr4:18338319-18338455 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 728-854
Cow position: chr4:3356467-3356336 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 728-854
Cow position: chr4:5881622-5881753 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-854
Cow position: chr4:9846477-9846348 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 121

Conread position: 728-855
Cow position: chr4:160624-160756 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 728-856
Cow position: chr4:98746-98613 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:357372-357507 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:530885-531020 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:827675-827810 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:1048797-1048662 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:3127277-3127412 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:5443358-5443223 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:6267724-6267590 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 44

Conread position: 728-858
Cow position: chr4:6865041-6864906 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:14387289-14387418 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 67

Conread position: 728-858
Cow position: chr4:15460798-15460663 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:16060746-16060881 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:16361662-16361798 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:17092397-17092265 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 47

Conread position: 728-858
Cow position: chr4:17501864-17501729 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:25598019-25597884 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:27655117-27654982 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:30472680-30472815 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:32213639-32213774 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 728-858
Cow position: chr4:33022172-33022038 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:36897840-36897975 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 728-858
Cow position: chr4:41956230-41956365 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:41960366-41960501 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:43318169-43318034 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr4:46666376-46666511 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 728-858
Cow position: chr4:65222293-65222158 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 729-858
Cow position: chr4:6567847-6567981 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 730-858
Cow position: chr4:10883006-10883139 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 730-858
Cow position: chr4:28653026-28652893 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 0

Show alignments to all cow chromosomes.