Cow genome map
Conread name: | Pig4-TMW8066D01 |
Conread position: | 4-701 |
Cow position: | chr5:1340360-1339668 (view UCSC Genome Browser custom track) |
Alignm length: | 719 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 208 |
Conread position: | 5-701 |
Cow position: | chr5:40131034-40130337 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 191 |
Conread position: | 6-711 |
Cow position: | chr5:58191192-58190491 (view UCSC Genome Browser custom track) |
Alignm length: | 727 |
Alignm identity: | 543 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 133 |
Conread position: | 7-162 |
Cow position: | chr5:7142503-7142345 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 54, 138 |
Conread position: | 7-186 |
Cow position: | chr5:987498-987314 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 152 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 7-193 |
Cow position: | chr5:3502536-3502345 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 157 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 7-193 |
Cow position: | chr5:49222920-49222730 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 117 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 62, 115 |
Conread position: | 7-194 |
Cow position: | chr5:47829505-47829298 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 159 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 7-202 |
Cow position: | chr5:57001090-57001283 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 151 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 132, 65 |
Conread position: | 7-295 |
Cow position: | chr5:50871177-50871450 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 188 |
Conread position: | 7-297 |
Cow position: | chr5:41065936-41065662 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 222 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 62, 187 |
Conread position: | 7-375 |
Cow position: | chr5:6587018-6586665 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 187 |
Conread position: | 7-382 |
Cow position: | chr5:31327104-31327462 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 132 |
Conread position: | 7-410 |
Cow position: | chr5:10813180-10812793 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 186 |
Conread position: | 7-447 |
Cow position: | chr5:50505203-50505630 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 189 |
Conread position: | 7-458 |
Cow position: | chr5:46737024-46736589 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 189 |
Conread position: | 7-475 |
Cow position: | chr5:55629553-55630010 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 187 |
Conread position: | 7-481 |
Cow position: | chr5:3787507-3787970 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 187 |
Conread position: | 7-481 |
Cow position: | chr5:73487489-73487025 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 187 |
Conread position: | 7-515 |
Cow position: | chr5:37378696-37379196 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 186 |
Conread position: | 7-597 |
Cow position: | chr5:4017644-4017061 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 190 |
Conread position: | 7-645 |
Cow position: | chr5:76096621-76097251 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 187 |
Conread position: | 7-675 |
Cow position: | chr5:2975360-2976007 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 79 |
Conread position: | 7-678 |
Cow position: | chr5:23830757-23830083 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 185 |
Conread position: | 7-696 |
Cow position: | chr5:18120912-18120224 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 541 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 186 |
Conread position: | 7-696 |
Cow position: | chr5:49520281-49520965 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 529 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 101 |
Conread position: | 7-700 |
Cow position: | chr5:54787551-54786856 (view UCSC Genome Browser custom track) |
Alignm length: | 720 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 187 |
Conread position: | 7-701 |
Cow position: | chr5:4756613-4755922 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 548 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 188 |
Conread position: | 7-701 |
Cow position: | chr5:5926399-5925708 (view UCSC Genome Browser custom track) |
Alignm length: | 718 |
Alignm identity: | 542 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 188 |
Conread position: | 7-701 |
Cow position: | chr5:10920405-10921098 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 187 |
Conread position: | 7-701 |
Cow position: | chr5:12731145-12730457 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 546 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 117 |
Conread position: | 7-701 |
Cow position: | chr5:23958760-23958071 (view UCSC Genome Browser custom track) |
Alignm length: | 714 |
Alignm identity: | 548 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 187 |
Conread position: | 7-701 |
Cow position: | chr5:26077623-26076947 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 36 |
Conread position: | 7-701 |
Cow position: | chr5:32774335-32775029 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 535 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 191 |
Conread position: | 7-701 |
Cow position: | chr5:49118768-49118089 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 125 |
Conread position: | 7-711 |
Cow position: | chr5:10774693-10773994 (view UCSC Genome Browser custom track) |
Alignm length: | 726 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 131 |
Conread position: | 7-711 |
Cow position: | chr5:46665567-46666271 (view UCSC Genome Browser custom track) |
Alignm length: | 728 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 186 |
Conread position: | 7-746 |
Cow position: | chr5:59062206-59062946 (view UCSC Genome Browser custom track) |
Alignm length: | 765 |
Alignm identity: | 574 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 177 |
Conread position: | 7-858 |
Cow position: | chr5:46777963-46778787 (view UCSC Genome Browser custom track) |
Alignm length: | 863 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 186 |
Conread position: | 8-195 |
Cow position: | chr5:59283873-59284064 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 154 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 61, 187 |
Conread position: | 8-205 |
Cow position: | chr5:28014578-28014778 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 152 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 52, 112 |
Conread position: | 8-425 |
Cow position: | chr5:31708134-31708533 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 41 |
Conread position: | 8-693 |
Cow position: | chr5:54696236-54695545 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 176 |
Conread position: | 8-701 |
Cow position: | chr5:45701888-45702574 (view UCSC Genome Browser custom track) |
Alignm length: | 718 |
Alignm identity: | 542 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 102 |
Conread position: | 11-563 |
Cow position: | chr5:59084575-59084035 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 131-701 |
Cow position: | chr5:4386899-4387477 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 26 |
Conread position: | 229-743 |
Cow position: | chr5:12641671-12641141 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 262 |
Conread position: | 237-693 |
Cow position: | chr5:57001271-57001749 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 93 |
Conread position: | 238-693 |
Cow position: | chr5:27489741-27490189 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 84 |
Conread position: | 308-716 |
Cow position: | chr5:51167470-51167039 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 402 |
Conread position: | 453-671 |
Cow position: | chr5:47469788-47470013 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 175 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 12, 35 |
Conread position: | 512-719 |
Cow position: | chr5:23232355-23232574 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 21, 196 |
Conread position: | 561-696 |
Cow position: | chr5:18900087-18900228 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 725-858 |
Cow position: | chr5:1340360-1340222 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 726-858 |
Cow position: | chr5:40131034-40130896 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 728-854 |
Cow position: | chr5:7142503-7142373 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 728-854 |
Cow position: | chr5:32774335-32774466 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-855 |
Cow position: | chr5:10920405-10920537 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:987498-987363 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:3502536-3502401 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:3787507-3787642 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:4017644-4017507 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 728-858 |
Cow position: | chr5:4756613-4756478 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:6587018-6586883 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:10774693-10774558 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:10813180-10813045 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 111 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:12731145-12731014 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 62, 117 |
Conread position: | 728-858 |
Cow position: | chr5:18120912-18120777 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:23958760-23958625 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 728-858 |
Cow position: | chr5:31327104-31327239 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:37378696-37378831 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 728-858 |
Cow position: | chr5:41065936-41065799 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 110 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:46665567-46665702 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:46737024-46736887 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:47829505-47829370 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:49118768-49118633 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:49222920-49222786 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 111 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 62, 115 |
Conread position: | 728-858 |
Cow position: | chr5:50505203-50505338 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 728-858 |
Cow position: | chr5:50871177-50871312 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:54787551-54787416 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:57001090-57001217 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 728-858 |
Cow position: | chr5:59062206-59062341 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 728-858 |
Cow position: | chr5:76096621-76096756 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 729-858 |
Cow position: | chr5:31708134-31708266 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 111 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 61, 41 |
Conread position: | 729-858 |
Cow position: | chr5:59283873-59284007 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.