Cow genome map
| Conread name: | Pig4-TMW8066D01 |
| Conread position: | 5-720 |
| Cow position: | chr6:27171285-27171985 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 119 |
| Conread position: | 7-164 |
| Cow position: | chr6:47048041-47048203 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-169 |
| Cow position: | chr6:1409675-1409507 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-188 |
| Cow position: | chr6:1820921-1820734 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-188 |
| Cow position: | chr6:11269739-11269558 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 95 |
| Conread position: | 7-188 |
| Cow position: | chr6:24241112-24241294 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 7-193 |
| Cow position: | chr6:27474137-27474325 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 91 |
| Conread position: | 7-193 |
| Cow position: | chr6:30273186-30272995 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 7-193 |
| Cow position: | chr6:41229151-41229342 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-195 |
| Cow position: | chr6:27528312-27528120 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 7-206 |
| Cow position: | chr6:10338938-10338739 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 7-207 |
| Cow position: | chr6:67213567-67213367 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 54, 118 |
| Conread position: | 7-320 |
| Cow position: | chr6:28642831-28642534 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-353 |
| Cow position: | chr6:44002379-44002727 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 114 |
| Conread position: | 7-421 |
| Cow position: | chr6:68028854-68029254 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-436 |
| Cow position: | chr6:329758-329345 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-436 |
| Cow position: | chr6:2876977-2876565 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-477 |
| Cow position: | chr6:14390636-14391095 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-529 |
| Cow position: | chr6:58953627-58953113 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 7-530 |
| Cow position: | chr6:62663424-62663929 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 7-534 |
| Cow position: | chr6:45587655-45588155 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 7-555 |
| Cow position: | chr6:26669155-26668623 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-580 |
| Cow position: | chr6:43431651-43431089 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-591 |
| Cow position: | chr6:50718379-50718945 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-694 |
| Cow position: | chr6:52694733-52695410 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 7-695 |
| Cow position: | chr6:477247-477930 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 7-701 |
| Cow position: | chr6:183835-183151 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 193 |
| Conread position: | 7-701 |
| Cow position: | chr6:2556348-2557039 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 186 |
| Conread position: | 7-701 |
| Cow position: | chr6:2580128-2580812 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 7-701 |
| Cow position: | chr6:7139633-7138940 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr6:13309680-13308990 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr6:15139466-15138775 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr6:16591664-16592364 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 138 |
| Conread position: | 7-701 |
| Cow position: | chr6:17596588-17595894 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr6:28703002-28702315 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 139 |
| Conread position: | 7-701 |
| Cow position: | chr6:44148841-44148159 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr6:51716240-51716937 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 195 |
| Conread position: | 7-701 |
| Cow position: | chr6:62578491-62577791 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-703 |
| Cow position: | chr6:43791875-43791185 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 179 |
| Conread position: | 7-717 |
| Cow position: | chr6:3150943-3151637 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 7-731 |
| Cow position: | chr6:8203902-8204601 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 7-743 |
| Cow position: | chr6:49898-49135 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 7-743 |
| Cow position: | chr6:28187131-28186396 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 183 |
| Conread position: | 7-743 |
| Cow position: | chr6:40276790-40277512 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-743 |
| Cow position: | chr6:53543804-53544538 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 191 |
| Conread position: | 7-743 |
| Cow position: | chr6:66233507-66234238 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 187 |
| Conread position: | 7-746 |
| Cow position: | chr6:43619431-43620172 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 159 |
| Conread position: | 8-457 |
| Cow position: | chr6:59594611-59595034 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 182 |
| Conread position: | 20-715 |
| Cow position: | chr6:238133-237450 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 175 |
| Conread position: | 236-696 |
| Cow position: | chr6:11723282-11722807 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 254 |
| Conread position: | 276-701 |
| Cow position: | chr6:18986000-18986411 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 431-701 |
| Cow position: | chr6:24241400-24241682 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 473-748 |
| Cow position: | chr6:19018266-19018548 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 726-858 |
| Cow position: | chr6:27171285-27171421 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 119 |
| Conread position: | 728-853 |
| Cow position: | chr6:44148841-44148711 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-854 |
| Cow position: | chr6:53543804-53543935 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-856 |
| Cow position: | chr6:15139466-15139333 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-857 |
| Cow position: | chr6:28703002-28702868 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:329758-329623 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:1820921-1820786 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:2556348-2556483 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:2876977-2876842 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:7139633-7139498 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:13309680-13309545 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:14390636-14390771 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:16591664-16591799 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:17596588-17596453 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:30273186-30273051 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:40276790-40276925 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:41229151-41229286 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:43619431-43619566 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:47048041-47048176 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:50718379-50718514 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:51716240-51716375 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:52694733-52694868 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:66233507-66233642 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 728-858 |
| Cow position: | chr6:68028854-68028989 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 729-858 |
| Cow position: | chr6:59594611-59594741 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.