Cow genome map

Conread name: Pig4-TMW8066D01

Conread position: 1-717
Cow position: chr7:41874478-41873768 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 195

Conread position: 4-694
Cow position: chr7:38398612-38399296 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 190

Conread position: 5-711
Cow position: chr7:112404-113108 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 189

Conread position: 7-154
Cow position: chr7:3121794-3121944 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 62, 129

Conread position: 7-188
Cow position: chr7:8143179-8142991 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr7:6646593-6646402 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 62, 0

Conread position: 7-193
Cow position: chr7:27458932-27458752 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 62, 113

Conread position: 7-193
Cow position: chr7:34487711-34487903 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 7-296
Cow position: chr7:28664008-28663736 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 132

Conread position: 7-306
Cow position: chr7:6721938-6722245 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 188, 85

Conread position: 7-312
Cow position: chr7:37010171-37009882 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-312
Cow position: chr7:61579298-61579587 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 62, 187

Conread position: 7-366
Cow position: chr7:904351-904010 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-373
Cow position: chr7:20773546-20773197 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 132

Conread position: 7-384
Cow position: chr7:48804638-48804277 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-420
Cow position: chr7:67800622-67801031 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 131

Conread position: 7-423
Cow position: chr7:6629504-6629079 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 147

Conread position: 7-453
Cow position: chr7:19468627-19468198 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-687
Cow position: chr7:45947354-45946675 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 188

Conread position: 7-695
Cow position: chr7:1368882-1368201 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 158

Conread position: 7-695
Cow position: chr7:7260316-7261002 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 131

Conread position: 7-696
Cow position: chr7:51016039-51016718 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 141

Conread position: 7-700
Cow position: chr7:27100493-27099787 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-700
Cow position: chr7:64247792-64247115 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 118

Conread position: 7-701
Cow position: chr7:14113-13426 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 132

Conread position: 7-701
Cow position: chr7:546634-547335 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 192

Conread position: 7-701
Cow position: chr7:6627608-6626890 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 147

Conread position: 7-701
Cow position: chr7:8337160-8337862 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-701
Cow position: chr7:11421775-11421096 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 58

Conread position: 7-701
Cow position: chr7:13532110-13531422 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-701
Cow position: chr7:34817442-34818132 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-701
Cow position: chr7:60728659-60727973 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 188

Conread position: 7-701
Cow position: chr7:67430354-67431043 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 119

Conread position: 7-708
Cow position: chr7:52764083-52764778 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-711
Cow position: chr7:11462341-11461635 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 190

Conread position: 7-711
Cow position: chr7:20797655-20796958 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 192

Conread position: 7-711
Cow position: chr7:26928381-26927679 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 187

Conread position: 7-711
Cow position: chr7:55040688-55039985 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 187

Conread position: 7-731
Cow position: chr7:65812621-65813349 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 195

Conread position: 7-743
Cow position: chr7:6665284-6666030 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-746
Cow position: chr7:10429627-10428889 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 127

Conread position: 7-746
Cow position: chr7:37164660-37165395 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 186

Conread position: 7-748
Cow position: chr7:55536127-55535381 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 192

Conread position: 8-206
Cow position: chr7:42871942-42872148 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 8-218
Cow position: chr7:5308308-5308097 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 61, 131

Conread position: 8-425
Cow position: chr7:33066928-33066529 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 187

Conread position: 8-683
Cow position: chr7:29364663-29363996 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 183

Conread position: 9-747
Cow position: chr7:49828536-49827813 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 186

Conread position: 14-725
Cow position: chr7:24933752-24933049 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 18

Conread position: 20-725
Cow position: chr7:21313718-21314405 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 113

Conread position: 27-193
Cow position: chr7:39133297-39133477 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 229-693
Cow position: chr7:56822725-56823196 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 234-700
Cow position: chr7:42225791-42225313 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 256

Conread position: 251-746
Cow position: chr7:42872149-42872655 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 65

Conread position: 326-687
Cow position: chr7:42426945-42427319 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 166

Conread position: 412-676
Cow position: chr7:59681573-59681853 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 80

Conread position: 421-701
Cow position: chr7:49071819-49071525 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 453-695
Cow position: chr7:28087322-28087572 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 33

Conread position: 471-696
Cow position: chr7:27789734-27789964 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 13

Conread position: 496-701
Cow position: chr7:39096219-39096005 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 209

Conread position: 725-858
Cow position: chr7:38398612-38398750 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 726-858
Cow position: chr7:112404-112541 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 728-839
Cow position: chr7:64247792-64247676 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-845
Cow position: chr7:27458932-27458809 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-854
Cow position: chr7:546634-546765 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-854
Cow position: chr7:11462341-11462210 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-854
Cow position: chr7:65812621-65812752 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 728-856
Cow position: chr7:51016039-51016173 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 728-857
Cow position: chr7:11421775-11421648 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 728-857
Cow position: chr7:52764083-52764217 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:14113-13978 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 728-858
Cow position: chr7:1368882-1368751 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 728-858
Cow position: chr7:3121794-3121929 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:6627608-6627473 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:6629504-6629369 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:6646593-6646458 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:6665284-6665419 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:6721938-6722066 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 728-858
Cow position: chr7:7260316-7260451 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:8337160-8337295 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:10429627-10429490 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:13532110-13531973 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:19468627-19468492 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:20773546-20773411 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 728-858
Cow position: chr7:26928381-26928246 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 728-858
Cow position: chr7:27100493-27100358 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:34487711-34487846 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:34817442-34817577 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:37164660-37164795 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:45947354-45947219 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:48804638-48804503 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:55040688-55040553 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:60728659-60728524 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:61579298-61579433 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 728-858
Cow position: chr7:67800622-67800757 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 729-858
Cow position: chr7:29364663-29364529 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 729-858
Cow position: chr7:42871942-42872076 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.