Cow genome map
| Conread name: | Pig4-TMW8066D01 |
| Conread position: | 4-601 |
| Cow position: | chr9:31066352-31066940 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 6-425 |
| Cow position: | chr9:2497105-2496707 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 170 |
| Conread position: | 6-701 |
| Cow position: | chr9:30828376-30829076 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 188 |
| Conread position: | 7-148 |
| Cow position: | chr9:25904158-25904302 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 7-162 |
| Cow position: | chr9:51212319-51212478 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 7-163 |
| Cow position: | chr9:48149908-48150068 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 63, 149 |
| Conread position: | 7-188 |
| Cow position: | chr9:22440708-22440895 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 134 |
| Conread position: | 7-193 |
| Cow position: | chr9:7060429-7060240 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 138 |
| Conread position: | 7-207 |
| Cow position: | chr9:3224014-3223809 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 182 |
| Conread position: | 7-283 |
| Cow position: | chr9:8781291-8781031 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-302 |
| Cow position: | chr9:27036537-27036816 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 7-355 |
| Cow position: | chr9:6709595-6709925 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 92 |
| Conread position: | 7-425 |
| Cow position: | chr9:64015035-64014634 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 132 |
| Conread position: | 7-448 |
| Cow position: | chr9:44819770-44820207 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 7-453 |
| Cow position: | chr9:2679909-2680345 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 191 |
| Conread position: | 7-543 |
| Cow position: | chr9:44384884-44385420 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 7-579 |
| Cow position: | chr9:26737558-26738119 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 7-627 |
| Cow position: | chr9:50792352-50792964 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-647 |
| Cow position: | chr9:31112762-31113390 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 132 |
| Conread position: | 7-677 |
| Cow position: | chr9:1994770-1994112 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 176 |
| Conread position: | 7-677 |
| Cow position: | chr9:7004370-7005023 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 187 |
| Conread position: | 7-678 |
| Cow position: | chr9:29789051-29788394 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 7-682 |
| Cow position: | chr9:46041615-46040956 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 7-701 |
| Cow position: | chr9:203657-202970 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-701 |
| Cow position: | chr9:17304339-17303646 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 218 |
| Conread position: | 7-701 |
| Cow position: | chr9:31809212-31809903 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 189 |
| Conread position: | 7-701 |
| Cow position: | chr9:42311328-42312013 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 7-701 |
| Cow position: | chr9:47043597-47044291 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 109 |
| Conread position: | 7-701 |
| Cow position: | chr9:56302815-56302119 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 191 |
| Conread position: | 7-701 |
| Cow position: | chr9:59481203-59480528 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 185 |
| Conread position: | 7-708 |
| Cow position: | chr9:45875151-45875847 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 132 |
| Conread position: | 7-711 |
| Cow position: | chr9:38677781-38678466 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 117 |
| Conread position: | 7-715 |
| Cow position: | chr9:3310251-3310953 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 7-715 |
| Cow position: | chr9:17062749-17062054 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 185 |
| Conread position: | 7-719 |
| Cow position: | chr9:14001692-14002382 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-738 |
| Cow position: | chr9:28679592-28680337 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 7-743 |
| Cow position: | chr9:28023436-28024176 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 190 |
| Conread position: | 7-748 |
| Cow position: | chr9:1250361-1249622 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 132 |
| Conread position: | 8-503 |
| Cow position: | chr9:8142142-8142620 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 188 |
| Conread position: | 8-711 |
| Cow position: | chr9:2212777-2213476 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 189 |
| Conread position: | 9-188 |
| Cow position: | chr9:25188734-25188918 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 41, 143 |
| Conread position: | 9-425 |
| Cow position: | chr9:1074537-1074140 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 187 |
| Conread position: | 26-192 |
| Cow position: | chr9:17101410-17101238 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 29-555 |
| Cow position: | chr9:3805294-3805806 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 166 |
| Conread position: | 115-687 |
| Cow position: | chr9:17313259-17313812 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 228-679 |
| Cow position: | chr9:24979807-24979346 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 23 |
| Conread position: | 260-701 |
| Cow position: | chr9:1729438-1728984 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 231 |
| Conread position: | 380-694 |
| Cow position: | chr9:10856009-10856333 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 444-590 |
| Cow position: | chr9:26082324-26082174 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 518-701 |
| Cow position: | chr9:792180-791992 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 725-858 |
| Cow position: | chr9:31066352-31066488 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 727-858 |
| Cow position: | chr9:30828376-30828513 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 728-854 |
| Cow position: | chr9:26737558-26737689 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-854 |
| Cow position: | chr9:28023436-28023567 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-856 |
| Cow position: | chr9:2679909-2680042 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-857 |
| Cow position: | chr9:7060429-7060295 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:203657-203522 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:1250361-1250226 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:1994770-1994635 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:3310251-3310385 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 728-858 |
| Cow position: | chr9:7004370-7004505 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:14001692-14001827 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:17062749-17062618 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:17304339-17304204 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:25904158-25904292 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 728-858 |
| Cow position: | chr9:27036537-27036672 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:28679592-28679727 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:31112762-31112897 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:42311328-42311462 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 728-858 |
| Cow position: | chr9:44384884-44385019 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:45875151-45875286 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:47043597-47043731 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 109 |
| Conread position: | 728-858 |
| Cow position: | chr9:48149908-48150043 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:50792352-50792487 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:51212319-51212453 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 728-858 |
| Cow position: | chr9:56302815-56302676 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 728-858 |
| Cow position: | chr9:64015035-64014900 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 730-858 |
| Cow position: | chr9:25188734-25188868 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.