Cow genome map
| Conread name: | Pla1-C000001059_E08 |
| Conread position: | 2-184 |
| Cow position: | chr3:63689731-63689915 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 2-201 |
| Cow position: | chr3:3059408-3059203 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 138 |
| Conread position: | 2-219 |
| Cow position: | chr3:19946757-19946532 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:22725255-22725479 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 2-219 |
| Cow position: | chr3:24443580-24443805 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:24586729-24586954 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:27920962-27920739 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 72, 102 |
| Conread position: | 2-219 |
| Cow position: | chr3:30320778-30320553 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:43190756-43190981 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:48525261-48525036 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:49998652-49998427 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:50124485-50124707 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 2-219 |
| Cow position: | chr3:53880970-53881191 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 180, 71 |
| Conread position: | 2-219 |
| Cow position: | chr3:54655284-54655060 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:57455517-57455295 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 73, 52 |
| Conread position: | 2-219 |
| Cow position: | chr3:64025616-64025841 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:72389476-72389248 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 174 |
| Conread position: | 2-219 |
| Cow position: | chr3:72670041-72670264 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 72, 129 |
| Conread position: | 2-219 |
| Cow position: | chr3:77581133-77580908 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-245 |
| Cow position: | chr3:36402108-36401862 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-192 |
| Cow position: | chr3:6875749-6875940 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 5-197 |
| Cow position: | chr3:69963290-69963488 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-218 |
| Cow position: | chr3:27865686-27865466 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 69, 114 |
| Conread position: | 5-219 |
| Cow position: | chr3:23205367-23205589 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 5, 19 |
| Conread position: | 7-184 |
| Cow position: | chr3:25689158-25688980 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 7-184 |
| Cow position: | chr3:51937563-51937741 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 7-219 |
| Cow position: | chr3:49734081-49733861 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 23-181 |
| Cow position: | chr3:20380221-20380377 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 93 |
| Conread position: | 64-200 |
| Cow position: | chr3:15191770-15191626 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 72-215 |
| Cow position: | chr3:29641853-29641708 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 74-219 |
| Cow position: | chr3:49742903-49742753 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 90-219 |
| Cow position: | chr3:55729470-55729336 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
Show alignments to all cow chromosomes.