Cow genome map
| Conread name: | Pla1-C000001059_E08 |
| Conread position: | 2-181 |
| Cow position: | chr6:53936068-53936250 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-197 |
| Cow position: | chr6:28103304-28103507 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-211 |
| Cow position: | chr6:33950608-33950819 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 2-219 |
| Cow position: | chr6:1106670-1106897 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 173 |
| Conread position: | 2-219 |
| Cow position: | chr6:1507949-1508168 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 180, 65 |
| Conread position: | 2-219 |
| Cow position: | chr6:3485840-3486061 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 169, 72 |
| Conread position: | 2-219 |
| Cow position: | chr6:3757294-3757069 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:3886948-3887173 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:5750490-5750265 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:10043773-10043552 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 181, 65 |
| Conread position: | 2-219 |
| Cow position: | chr6:11722636-11722861 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:12663755-12663980 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:14142931-14143155 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 2-219 |
| Cow position: | chr6:19104351-19104577 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:25791140-25791365 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:27151882-27152107 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:28135493-28135268 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:28278164-28277943 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:34505486-34505709 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:35417359-35417578 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 2-219 |
| Cow position: | chr6:36530845-36530620 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:38874100-38874325 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:43777812-43777592 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 180, 21 |
| Conread position: | 2-219 |
| Cow position: | chr6:50486236-50486461 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chr6:59595810-59595589 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 72, 105 |
| Conread position: | 2-219 |
| Cow position: | chr6:65849351-65849570 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 4-219 |
| Cow position: | chr6:10646241-10646018 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 5-216 |
| Cow position: | chr6:38274127-38273913 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-217 |
| Cow position: | chr6:7176970-7177182 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 5-218 |
| Cow position: | chr6:3573340-3573119 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 5-219 |
| Cow position: | chr6:37478777-37478556 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 69, 122 |
| Conread position: | 6-216 |
| Cow position: | chr6:18986573-18986356 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 6-219 |
| Cow position: | chr6:28171461-28171240 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 7-219 |
| Cow position: | chr6:9264780-9264991 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 8-218 |
| Cow position: | chr6:1536260-1536042 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 14-184 |
| Cow position: | chr6:49422957-49423130 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 30-219 |
| Cow position: | chr6:24625059-24625253 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 72-215 |
| Cow position: | chr6:51895577-51895725 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.