Cow genome map
| Conread name: | Pla1-C000001059_E08 |
| Conread position: | 1-192 |
| Cow position: | chrX:35887488-35887296 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 2-197 |
| Cow position: | chrX:26756244-26756447 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-198 |
| Cow position: | chrX:28556777-28556579 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 2-201 |
| Cow position: | chrX:17053966-17053749 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-201 |
| Cow position: | chrX:18192812-18192613 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 2-201 |
| Cow position: | chrX:27317626-27317419 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:3082742-3082962 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 178, 50 |
| Conread position: | 2-219 |
| Cow position: | chrX:3360220-3360001 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 2-219 |
| Cow position: | chrX:5640480-5640705 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:6580340-6580115 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:9095042-9094817 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:12652095-12652320 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:21591688-21591460 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:21767028-21766803 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:22818470-22818247 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 72, 52 |
| Conread position: | 2-219 |
| Cow position: | chrX:23453656-23453881 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:23573410-23573630 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 181, 65 |
| Conread position: | 2-219 |
| Cow position: | chrX:26623407-26623636 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 219 |
| Conread position: | 2-219 |
| Cow position: | chrX:30090627-30090844 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 178, 58 |
| Conread position: | 2-219 |
| Cow position: | chrX:30167678-30167904 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:31340268-31340487 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 71, 185 |
| Conread position: | 2-219 |
| Cow position: | chrX:31727872-31727647 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:35532255-35532030 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:36839118-36838893 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:37814546-37814321 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-219 |
| Cow position: | chrX:38589789-38590010 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 73, 10 |
| Conread position: | 5-218 |
| Cow position: | chrX:45417209-45417427 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 69, 19 |
| Conread position: | 5-219 |
| Cow position: | chrX:12666936-12667158 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-219 |
| Cow position: | chrX:24444676-24444898 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 5-219 |
| Cow position: | chrX:32064775-32064991 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 175, 52 |
| Conread position: | 6-201 |
| Cow position: | chrX:21646887-21647086 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 177, 91 |
| Conread position: | 6-219 |
| Cow position: | chrX:6280402-6280629 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 6-219 |
| Cow position: | chrX:10867459-10867675 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 6-219 |
| Cow position: | chrX:28648456-28648669 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 173, 51 |
| Conread position: | 8-219 |
| Cow position: | chrX:30181535-30181754 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 9-219 |
| Cow position: | chrX:21831904-21831686 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 10-235 |
| Cow position: | chrX:15040155-15040388 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 18-219 |
| Cow position: | chrX:17665416-17665625 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 18-233 |
| Cow position: | chrX:4767085-4766864 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 54-192 |
| Cow position: | chrX:12312639-12312774 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.