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Cow genome map

           
Conread name:
           
Pla1-C0000023_G24
        

               
Conread position:
               
1-323
               

               
Cow position:
               
chr16:25170188-25170506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr16:22008949-22009264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr16:26649830-26649523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr16:17626716-17627050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
8-323
               

               
Cow position:
               
chr16:45677780-45678091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
27-323
               

               
Cow position:
               
chr16:9985576-9985280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 8
               

               
Conread position:
               
27-323
               

               
Cow position:
               
chr16:14242181-14242481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 5
               

               
Conread position:
               
28-332
               

               
Cow position:
               
chr16:31348957-31348644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr16:55308723-55308513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 78
               

               
Conread position:
               
29-260
               

               
Cow position:
               
chr16:11619560-11619799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
29-265
               

               
Cow position:
               
chr16:54287682-54287920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
29-277
               

               
Cow position:
               
chr16:37116880-37117141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
37, 246
               

               
Conread position:
               
29-286
               

               
Cow position:
               
chr16:594423-594148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
29-312
               

               
Cow position:
               
chr16:7542095-7542399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
29-312
               

               
Cow position:
               
chr16:25965312-25965601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
29-312
               

               
Cow position:
               
chr16:52889604-52889310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
29-323
               

               
Cow position:
               
chr16:30909125-30908834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
29-325
               

               
Cow position:
               
chr16:12361166-12360859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 231
               

               
Conread position:
               
29-332
               

               
Cow position:
               
chr16:51696901-51697209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
30-323
               

               
Cow position:
               
chr16:46433516-46433212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
31-241
               

               
Cow position:
               
chr16:13791321-13791548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
31-265
               

               
Cow position:
               
chr16:18036774-18037002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
31-292
               

               
Cow position:
               
chr16:30143405-30143118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 170
               

               
Conread position:
               
31-307
               

               
Cow position:
               
chr16:11775242-11774951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
31-322
               

               
Cow position:
               
chr16:4626587-4626279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
31-322
               

               
Cow position:
               
chr16:16236320-16236013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
29, 135
               

               
Conread position:
               
31-323
               

               
Cow position:
               
chr16:4910723-4910412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
31-323
               

               
Cow position:
               
chr16:23563945-23564245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 150
               

               
Conread position:
               
31-323
               

               
Cow position:
               
chr16:29557823-29557512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
31-325
               

               
Cow position:
               
chr16:22919305-22919583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
153, 21
               

               
Conread position:
               
31-325
               

               
Cow position:
               
chr16:42443960-42444271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 168
               

               
Conread position:
               
31-325
               

               
Cow position:
               
chr16:43801101-43800803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr16:19408704-19408409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
142, 83
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr16:27659920-27659627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
198, 23
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr16:33645822-33646134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr16:41689515-41689813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
31-331
               

               
Cow position:
               
chr16:12633701-12634006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
31-331
               

               
Cow position:
               
chr16:18205779-18206081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
31-331
               

               
Cow position:
               
chr16:33054656-33054360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
31-331
               

               
Cow position:
               
chr16:45813893-45813578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr16:9973694-9973375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
31-356
               

               
Cow position:
               
chr16:32132336-32132654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
32-214
               

               
Cow position:
               
chr16:30209571-30209754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
32-219
               

               
Cow position:
               
chr16:14028811-14028620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
32-220
               

               
Cow position:
               
chr16:11620994-11620802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
32-222
               

               
Cow position:
               
chr16:43804306-43804505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
32-223
               

               
Cow position:
               
chr16:47620189-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 160
               

               
Conread position:
               
32-224
               

               
Cow position:
               
chr16:4103349-4103148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 157
               

               
Conread position:
               
32-226
               

               
Cow position:
               
chr16:44973304-44973510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 160
               

               
Conread position:
               
32-227
               

               
Cow position:
               
chr16:26500969-26501175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
32-227
               

               
Cow position:
               
chr16:29066977-29067178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
32-228
               

               
Cow position:
               
chr16:16280621-16280430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
32-234
               

               
Cow position:
               
chr16:22868366-22868154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
32-239
               

               
Cow position:
               
chr16:4712710-4712929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
32-244
               

               
Cow position:
               
chr16:27249219-27249438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
32-245
               

               
Cow position:
               
chr16:24228541-24228317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
32-245
               

               
Cow position:
               
chr16:44676696-44676909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
32-247
               

               
Cow position:
               
chr16:4372687-4372456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr16:45534992-45535216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
32-252
               

               
Cow position:
               
chr16:26342086-26342308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
32-265
               

               
Cow position:
               
chr16:39237752-39238001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
32-266
               

               
Cow position:
               
chr16:30515779-30515533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr16:4981572-4981310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr16:42970122-42969859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
32-278
               

               
Cow position:
               
chr16:13233136-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
32-279
               

               
Cow position:
               
chr16:46521711-46521958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
32-282
               

               
Cow position:
               
chr16:45047815-45047564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr16:24672552-24672282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr16:37380080-37380346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
32-288
               

               
Cow position:
               
chr16:13752314-13752054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
32-288
               

               
Cow position:
               
chr16:14360913-14361181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 152
               

               
Conread position:
               
32-293
               

               
Cow position:
               
chr16:16552371-16552644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
32-293
               

               
Cow position:
               
chr16:39695668-39695400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr16:26610442-26610723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
32-295
               

               
Cow position:
               
chr16:9932969-9933241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
24, 227
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr16:10592249-10592519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr16:47643228-47643502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr16:16548420-16548707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
43, 264
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr16:5725283-5725568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
32-316
               

               
Cow position:
               
chr16:4979622-4979908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
32-316
               

               
Cow position:
               
chr16:5636401-5636690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 226
               

               
Conread position:
               
32-316
               

               
Cow position:
               
chr16:11615419-11615139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
32-316
               

               
Cow position:
               
chr16:32781171-32781469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 230
               

               
Conread position:
               
32-316
               

               
Cow position:
               
chr16:33226723-33226433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
32-316
               

               
Cow position:
               
chr16:46628027-46627732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr16:8315368-8315086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
32-320
               

               
Cow position:
               
chr16:53627614-53627318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
32-321
               

               
Cow position:
               
chr16:18758035-18757728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
25, 204
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr16:4699161-4698876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr16:7429186-7429491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr16:27262136-27261838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:238070-238380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 172
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:3633924-3634229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:4192610-4192321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
39, 153
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:5845479-5845782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 160
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:7075727-7076025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 218
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:7498877-7499163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:8066072-8065775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
73, 130
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:8069009-8068711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 225
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:8812279-8811983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:13579034-13578748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:13698317-13698628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:13713103-13712820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:15824633-15824331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:17745644-17745949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:18354143-18353845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 214
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:20634069-20633763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 191
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:22808742-22808445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:23737992-23738294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 134
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:29158937-29159233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:34998791-34998513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
285, 47
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:37669921-37669624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:38663903-38663598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:40333516-40333213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:41752764-41752471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:42633939-42633631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:47820380-47820680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:48006682-48006380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 161
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:48340883-48340581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 163
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:48494747-48494440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:49126375-49126074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 204
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:49169574-49169268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:49336036-49336335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:51113068-51112767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 161
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:52169875-52170168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:52855211-52854909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 150
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr16:53086516-53086228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 129
               

               
Conread position:
               
32-325
               

               
Cow position:
               
chr16:15808780-15809094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
32-326
               

               
Cow position:
               
chr16:37062586-37062282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 209
               

               
Conread position:
               
32-327
               

               
Cow position:
               
chr16:16402518-16402217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
24, 167
               

               
Conread position:
               
32-327
               

               
Cow position:
               
chr16:18693323-18693033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
32-327
               

               
Cow position:
               
chr16:48492992-48493297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr16:4059168-4059473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr16:8438817-8438534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr16:8522578-8522272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 217
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr16:16096546-16096856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
14, 227
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr16:23066478-23066772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 177
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr16:11008150-11008467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 274
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr16:42340014-42340315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr16:8367015-8366709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 117
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr16:11957775-11957457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr16:13307057-13306752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 160
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr16:14568676-14568370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr16:23871842-23871531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr16:43105704-43105395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr16:43661262-43661571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr16:52275321-52275008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:820060-820375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:4857281-4856981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:5415944-5415642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:7504908-7505207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:12060222-12060539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 177
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:13195524-13195217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 244
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:13611641-13611334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:13689473-13689787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 159
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:17142741-17143056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:19003711-19003411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:19643702-19644011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
90, 142
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:22850137-22850446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 211
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:26373142-26372831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:28396287-28395960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:29655134-29655446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:31117811-31117494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 157
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:35188063-35188370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 25
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:39646364-39646664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:40562036-40562354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:41590588-41590897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:42242310-42241997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 163
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:42752669-42752968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:43275831-43276140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:44210741-44210435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:45731566-45731270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:45785547-45785858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 167
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:46552627-46552916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:48385593-48385281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 225
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr16:49229959-49229650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 288
               

               
Conread position:
               
32-332
               

               
Cow position:
               
chr16:23472560-23472871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 289
               

               
Conread position:
               
32-332
               

               
Cow position:
               
chr16:29766152-29766448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr16:8933611-8933302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr16:32302178-32301878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
220, 23
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr16:50288966-50289278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr16:56231632-56231953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
32-359
               

               
Cow position:
               
chr16:30096321-30095984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
33-224
               

               
Cow position:
               
chr16:9790821-9790617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
33-243
               

               
Cow position:
               
chr16:13973473-13973253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
33-245
               

               
Cow position:
               
chr16:7496012-7496232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
33-260
               

               
Cow position:
               
chr16:11274719-11274953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
33-266
               

               
Cow position:
               
chr16:47245398-47245645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
33-279
               

               
Cow position:
               
chr16:22860949-22860700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr16:16265293-16265015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 166
               

               
Conread position:
               
33-305
               

               
Cow position:
               
chr16:52789871-52790149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
33-314
               

               
Cow position:
               
chr16:21450657-21450951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
33-315
               

               
Cow position:
               
chr16:36203805-36203514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 280
               

               
Conread position:
               
33-316
               

               
Cow position:
               
chr16:48398436-48398148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chr16:7152363-7152059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 256
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chr16:20476346-20476648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chr16:25839425-25839733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chr16:41530481-41530187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chr16:54341809-54342099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chr16:54578977-54579279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 219
               

               
Conread position:
               
33-327
               

               
Cow position:
               
chr16:10148091-10148399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
33-327
               

               
Cow position:
               
chr16:53267538-53267840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
33-331
               

               
Cow position:
               
chr16:8026035-8025734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
33-331
               

               
Cow position:
               
chr16:11105359-11105674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
33-331
               

               
Cow position:
               
chr16:14685579-14685269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
33-331
               

               
Cow position:
               
chr16:19670522-19670232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
33-331
               

               
Cow position:
               
chr16:49125714-49125407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 177
               

               
Conread position:
               
33-331
               

               
Cow position:
               
chr16:52835071-52834767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
34-226
               

               
Cow position:
               
chr16:28692901-28692707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
34-261
               

               
Cow position:
               
chr16:4144875-4145114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 208
               

               
Conread position:
               
34-300
               

               
Cow position:
               
chr16:32327463-32327748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
34-321
               

               
Cow position:
               
chr16:24825881-24826184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
34-322
               

               
Cow position:
               
chr16:44584619-44584327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
34-323
               

               
Cow position:
               
chr16:3246386-3246092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
34-323
               

               
Cow position:
               
chr16:24855351-24855653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 229
               

               
Conread position:
               
34-323
               

               
Cow position:
               
chr16:51598792-51598500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
34-325
               

               
Cow position:
               
chr16:15370490-15370800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 305
               

               
Conread position:
               
34-325
               

               
Cow position:
               
chr16:19003260-19002977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
34-327
               

               
Cow position:
               
chr16:39165056-39165357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
34-328
               

               
Cow position:
               
chr16:42079031-42078730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 153
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr16:17982335-17982024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 229
               

               
Conread position:
               
34-331
               

               
Cow position:
               
chr16:5363703-5364022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
34-331
               

               
Cow position:
               
chr16:14758541-14758860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
34-331
               

               
Cow position:
               
chr16:22842242-22841939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
34-331
               

               
Cow position:
               
chr16:45554249-45554564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr16:9497462-9497139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
35-323
               

               
Cow position:
               
chr16:7418201-7418490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
36-321
               

               
Cow position:
               
chr16:51500749-51501040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
30, 134
               

               
Conread position:
               
36-325
               

               
Cow position:
               
chr16:571104-570804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 155
               

               
Conread position:
               
36-327
               

               
Cow position:
               
chr16:17288754-17289064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
35, 151
               

               
Conread position:
               
36-327
               

               
Cow position:
               
chr16:43505982-43505694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
36-331
               

               
Cow position:
               
chr16:8193261-8193575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
36-331
               

               
Cow position:
               
chr16:20025265-20025563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
36-331
               

               
Cow position:
               
chr16:22804769-22804477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
37-323
               

               
Cow position:
               
chr16:38620781-38621068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
37-332
               

               
Cow position:
               
chr16:45456773-45457084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
38-294
               

               
Cow position:
               
chr16:24747117-24747371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
38-323
               

               
Cow position:
               
chr16:50688341-50688634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr16:47852764-47852473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
38-331
               

               
Cow position:
               
chr16:14754507-14754202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
39-249
               

               
Cow position:
               
chr16:42072907-42072691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
39-302
               

               
Cow position:
               
chr16:6887624-6887358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
39-323
               

               
Cow position:
               
chr16:32837730-32837435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 179
               

               
Conread position:
               
39-323
               

               
Cow position:
               
chr16:48145582-48145290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
39-331
               

               
Cow position:
               
chr16:38905410-38905114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
41-318
               

               
Cow position:
               
chr16:38119622-38119342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
41-331
               

               
Cow position:
               
chr16:52133692-52133395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
44-298
               

               
Cow position:
               
chr16:4902415-4902676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
44-312
               

               
Cow position:
               
chr16:54679493-54679767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
44-314
               

               
Cow position:
               
chr16:10040013-10039743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
44-323
               

               
Cow position:
               
chr16:2223581-2223284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
44-323
               

               
Cow position:
               
chr16:17945350-17945634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
46-239
               

               
Cow position:
               
chr16:56912889-56912684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
46-262
               

               
Cow position:
               
chr16:21904994-21905214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
46-277
               

               
Cow position:
               
chr16:35195778-35195546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
46-293
               

               
Cow position:
               
chr16:46752444-46752188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
46-300
               

               
Cow position:
               
chr16:53048383-53048642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
46-303
               

               
Cow position:
               
chr16:42217858-42217597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
46-317
               

               
Cow position:
               
chr16:15762331-15762049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr16:6344607-6344329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr16:7665463-7665750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr16:20205284-20205574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr16:43308737-43308450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
46-331
               

               
Cow position:
               
chr16:5256828-5257117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
46-331
               

               
Cow position:
               
chr16:5741070-5741369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
46-333
               

               
Cow position:
               
chr16:30037163-30036867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
46-334
               

               
Cow position:
               
chr16:35623413-35623124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
47-261
               

               
Cow position:
               
chr16:49404326-49404108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chr16:10651062-10650833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
47-272
               

               
Cow position:
               
chr16:22124124-22123908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
144, 5
               

               
Conread position:
               
47-300
               

               
Cow position:
               
chr16:7077914-7077653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
47-322
               

               
Cow position:
               
chr16:28922613-28922885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
47-322
               

               
Cow position:
               
chr16:37452789-37452502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
47-323
               

               
Cow position:
               
chr16:7442277-7441990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
47-323
               

               
Cow position:
               
chr16:8076679-8076389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
47-323
               

               
Cow position:
               
chr16:34153750-34153458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 209
               

               
Conread position:
               
47-326
               

               
Cow position:
               
chr16:5836411-5836702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
47-328
               

               
Cow position:
               
chr16:3047512-3047224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
47-328
               

               
Cow position:
               
chr16:4275912-4275624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
47-331
               

               
Cow position:
               
chr16:8323157-8322861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
48-296
               

               
Cow position:
               
chr16:50521308-50521562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
48-300
               

               
Cow position:
               
chr16:38903612-38903368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
48-322
               

               
Cow position:
               
chr16:28833664-28833955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
51-330
               

               
Cow position:
               
chr16:51246780-51247054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 57
               

               
Conread position:
               
52-236
               

               
Cow position:
               
chr16:23033693-23033877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
52-300
               

               
Cow position:
               
chr16:35758045-35758292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
52-316
               

               
Cow position:
               
chr16:8236485-8236222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 155
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr16:20069661-20069945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr16:29037736-29038027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 211
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr16:14974699-14974427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
52-331
               

               
Cow position:
               
chr16:4499268-4499548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
49, 140
               

               
Conread position:
               
52-331
               

               
Cow position:
               
chr16:7549801-7550089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 231
               

               
Conread position:
               
53-275
               

               
Cow position:
               
chr16:21369314-21369549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 198
               

               
Conread position:
               
53-323
               

               
Cow position:
               
chr16:42734179-42733898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
53-330
               

               
Cow position:
               
chr16:51869474-51869759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 129
               

               
Conread position:
               
54-323
               

               
Cow position:
               
chr16:25386816-25387086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
54-323
               

               
Cow position:
               
chr16:35296908-35297190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
56-253
               

               
Cow position:
               
chr16:13792819-13792615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
57-247
               

               
Cow position:
               
chr16:50532903-50533091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
57-295
               

               
Cow position:
               
chr16:44723179-44722947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
148, 85
               

               
Conread position:
               
57-300
               

               
Cow position:
               
chr16:53891943-53891697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 164
               

               
Conread position:
               
57-321
               

               
Cow position:
               
chr16:56082516-56082254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
57-323
               

               
Cow position:
               
chr16:33704645-33704918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
57-323
               

               
Cow position:
               
chr16:45609829-45610098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
57-324
               

               
Cow position:
               
chr16:56875809-56875551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
57-326
               

               
Cow position:
               
chr16:56445560-56445300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 51
               

               
Conread position:
               
57-328
               

               
Cow position:
               
chr16:18402522-18402804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
17, 250
               

               
Conread position:
               
57-329
               

               
Cow position:
               
chr16:21317747-21317474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
57-330
               

               
Cow position:
               
chr16:48095923-48095644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
57-331
               

               
Cow position:
               
chr16:15960453-15960169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr16:7456622-7456346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 136
               

               
Conread position:
               
60-322
               

               
Cow position:
               
chr16:29712261-29712531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
61-327
               

               
Cow position:
               
chr16:689552-689820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
63-323
               

               
Cow position:
               
chr16:50282581-50282319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
65-325
               

               
Cow position:
               
chr16:42345757-42345498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
67-331
               

               
Cow position:
               
chr16:11102976-11102700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
69-293
               

               
Cow position:
               
chr16:38019972-38020191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
69-315
               

               
Cow position:
               
chr16:12320072-12320326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
69-323
               

               
Cow position:
               
chr16:1549023-1548765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
69-323
               

               
Cow position:
               
chr16:6319048-6319316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
69-323
               

               
Cow position:
               
chr16:22380505-22380241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
69-330
               

               
Cow position:
               
chr16:45139522-45139789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
69-336
               

               
Cow position:
               
chr16:33198584-33198311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 169
               

               
Conread position:
               
70-321
               

               
Cow position:
               
chr16:38243811-38243552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 166
               

               
Conread position:
               
73-331
               

               
Cow position:
               
chr16:27723067-27723345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
34, 152
               

               
Conread position:
               
76-323
               

               
Cow position:
               
chr16:8448787-8448542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
76-328
               

               
Cow position:
               
chr16:10772990-10773239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
77-319
               

               
Cow position:
               
chr16:36121122-36120874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 114
               

               
Conread position:
               
79-331
               

               
Cow position:
               
chr16:11082870-11083118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
81-308
               

               
Cow position:
               
chr16:54225644-54225421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
82-318
               

               
Cow position:
               
chr16:29095803-29096029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
84-330
               

               
Cow position:
               
chr16:30136029-30135786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 173
               

               
Conread position:
               
85-321
               

               
Cow position:
               
chr16:27160989-27160753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
87-300
               

               
Cow position:
               
chr16:30369221-30369437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
90-318
               

               
Cow position:
               
chr16:10162697-10162925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
90-331
               

               
Cow position:
               
chr16:23955955-23955711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
93-322
               

               
Cow position:
               
chr16:50667169-50667403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
95-323
               

               
Cow position:
               
chr16:55683183-55683411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
96-323
               

               
Cow position:
               
chr16:7583284-7583510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
96-327
               

               
Cow position:
               
chr16:16565010-16565237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
217, 21
               

               
Conread position:
               
101-323
               

               
Cow position:
               
chr16:10945539-10945328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
101-323
               

               
Cow position:
               
chr16:22984649-22984866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
101-323
               

               
Cow position:
               
chr16:33405603-33405381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr16:13483684-13483464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
101-327
               

               
Cow position:
               
chr16:51070028-51069796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
101-328
               

               
Cow position:
               
chr16:11085491-11085266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
102-331
               

               
Cow position:
               
chr16:47854836-47855059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
103-322
               

               
Cow position:
               
chr16:42240941-42241159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
104-237
               

               
Cow position:
               
chr16:30615085-30614953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
104-263
               

               
Cow position:
               
chr16:24249937-24249777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 81
               

               
Conread position:
               
104-267
               

               
Cow position:
               
chr16:14699815-14699975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
104-277
               

               
Cow position:
               
chr16:27019969-27020138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
104-277
               

               
Cow position:
               
chr16:54083930-54084103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-293
               

               
Cow position:
               
chr16:19047541-19047351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
104-311
               

               
Cow position:
               
chr16:2417695-2417489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr16:11939936-11940143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
172, 65
               

               
Conread position:
               
104-321
               

               
Cow position:
               
chr16:23730032-23729806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
104-321
               

               
Cow position:
               
chr16:30662367-30662159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
104-321
               

               
Cow position:
               
chr16:45703073-45702861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:4399631-4399848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:10504727-10504939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:12273963-12274181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
86, 161
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:17903755-17903532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:18052225-18052443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:25380599-25380382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:29677736-29677521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:40446148-40446377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
74, 154
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:41578120-41578339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:43674769-43674987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:48086973-48086757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:50453657-50453879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
160, 67
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:54226704-54226487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
104-325
               

               
Cow position:
               
chr16:21762077-21761855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 81
               

               
Conread position:
               
104-327
               

               
Cow position:
               
chr16:44581176-44580955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:6269851-6270075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:9904985-9905212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
69, 77
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:10032534-10032761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
221, 77
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:22772873-22773101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:33869866-33869644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:45121933-45122156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:50933976-50933766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:53089446-53089231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:53509088-53508863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
216, 68
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:54734140-54734357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
223, 75
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:56565492-56565717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
137, 77
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr16:56796771-56796545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
104-336
               

               
Cow position:
               
chr16:34754066-34753832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
105-329
               

               
Cow position:
               
chr16:30186539-30186761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 177
               

               
Conread position:
               
105-331
               

               
Cow position:
               
chr16:23366140-23366361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
106-323
               

               
Cow position:
               
chr16:591914-591694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr16:42176541-42176759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
110-323
               

               
Cow position:
               
chr16:13969471-13969254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
112-323
               

               
Cow position:
               
chr16:20871929-20872135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
113-297
               

               
Cow position:
               
chr16:28879847-28880026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr16:45300024-45299815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
113-331
               

               
Cow position:
               
chr16:19052543-19052758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
114-331
               

               
Cow position:
               
chr16:44683758-44683535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
115-331
               

               
Cow position:
               
chr16:37401161-37401373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
118-323
               

               
Cow position:
               
chr16:3114446-3114652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
119-321
               

               
Cow position:
               
chr16:7619269-7619074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
5, 123
               

               
Conread position:
               
120-322
               

               
Cow position:
               
chr16:18141418-18141216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 125
               

               
Conread position:
               
121-309
               

               
Cow position:
               
chr16:37719069-37719258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
121-316
               

               
Cow position:
               
chr16:41697174-41696986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
121-321
               

               
Cow position:
               
chr16:18072085-18072283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
121-323
               

               
Cow position:
               
chr16:8737976-8738178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
121-323
               

               
Cow position:
               
chr16:33267628-33267831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
121-323
               

               
Cow position:
               
chr16:40514569-40514369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
121-329
               

               
Cow position:
               
chr16:54664889-54664680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 129
               

               
Conread position:
               
121-330
               

               
Cow position:
               
chr16:32807381-32807171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
121-330
               

               
Cow position:
               
chr16:55945230-55945019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
121-331
               

               
Cow position:
               
chr16:26323603-26323397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
121-370
               

               
Cow position:
               
chr16:48545732-48545991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
198, 0
               

               
Conread position:
               
122-323
               

               
Cow position:
               
chr16:424901-424701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
122-371
               

               
Cow position:
               
chr16:13495951-13496203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 168
               

               
Conread position:
               
123-244
               

               
Cow position:
               
chr16:30371507-30371625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
123-323
               

               
Cow position:
               
chr16:36286768-36286571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
123-352
               

               
Cow position:
               
chr16:30359147-30358920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
124-316
               

               
Cow position:
               
chr16:17135145-17134954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr16:56665488-56665688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
124-329
               

               
Cow position:
               
chr16:53830671-53830473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr16:29527739-29527955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr16:33134856-33135058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr16:50931602-50931403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
164, 63
               

               
Conread position:
               
125-322
               

               
Cow position:
               
chr16:55592467-55592675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
125-331
               

               
Cow position:
               
chr16:7980707-7980911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
125-331
               

               
Cow position:
               
chr16:39683184-39682979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
202, 25
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr16:31079174-31078978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
126-328
               

               
Cow position:
               
chr16:41711598-41711789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
127-321
               

               
Cow position:
               
chr16:53792901-53792708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
131, 44
               

               
Conread position:
               
127-322
               

               
Cow position:
               
chr16:56831819-56831630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
127-323
               

               
Cow position:
               
chr16:44428797-44428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
128-308
               

               
Cow position:
               
chr16:13648255-13648425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
128-323
               

               
Cow position:
               
chr16:56671002-56670806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
130-307
               

               
Cow position:
               
chr16:31426264-31426439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
131-323
               

               
Cow position:
               
chr16:9830368-9830557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
134-274
               

               
Cow position:
               
chr16:15752628-15752765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
135-316
               

               
Cow position:
               
chr16:38091299-38091117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
135-323
               

               
Cow position:
               
chr16:42539664-42539476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
135-331
               

               
Cow position:
               
chr16:1220257-1220057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
135-331
               

               
Cow position:
               
chr16:12501236-12501040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chr16:8273911-8273715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
184, 47
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chr16:9500443-9500643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
137-331
               

               
Cow position:
               
chr16:17135655-17135845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
138-330
               

               
Cow position:
               
chr16:46430224-46430033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
139-323
               

               
Cow position:
               
chr16:9552990-9553170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
139-323
               

               
Cow position:
               
chr16:25154816-25154630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
139-323
               

               
Cow position:
               
chr16:28444560-28444377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
139-329
               

               
Cow position:
               
chr16:9161008-9161202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
139-330
               

               
Cow position:
               
chr16:22327429-22327630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
139-331
               

               
Cow position:
               
chr16:26030955-26030756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
148, 177
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr16:42433185-42432998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
140-329
               

               
Cow position:
               
chr16:55968364-55968556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 148
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr16:496445-496255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
141-323
               

               
Cow position:
               
chr16:42977394-42977579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 173
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr16:8768734-8768913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
142-323
               

               
Cow position:
               
chr16:46548344-46548155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
143-323
               

               
Cow position:
               
chr16:8441870-8441694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
143-323
               

               
Cow position:
               
chr16:31561685-31561868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
145-323
               

               
Cow position:
               
chr16:12077544-12077374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 39
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr16:10365854-10366050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
145-401
               

               
Cow position:
               
chr16:46452810-46452553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
35, 200
               

               
Conread position:
               
146-334
               

               
Cow position:
               
chr16:47304188-47304002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
147-327
               

               
Cow position:
               
chr16:28827241-28827061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
148-331
               

               
Cow position:
               
chr16:30601355-30601542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
149-322
               

               
Cow position:
               
chr16:11359095-11359263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
150-331
               

               
Cow position:
               
chr16:33530353-33530530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
151-323
               

               
Cow position:
               
chr16:589768-589603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
151-330
               

               
Cow position:
               
chr16:12688167-12687992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
152-331
               

               
Cow position:
               
chr16:51043594-51043773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
155-323
               

               
Cow position:
               
chr16:7394990-7394818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
160-323
               

               
Cow position:
               
chr16:15953872-15953706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
160-323
               

               
Cow position:
               
chr16:18048203-18048042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
170-323
               

               
Cow position:
               
chr16:22738240-22738387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
172-323
               

               
Cow position:
               
chr16:22207040-22207190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
176-326
               

               
Cow position:
               
chr16:21370221-21370074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
177-331
               

               
Cow position:
               
chr16:45046802-45046959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
180-323
               

               
Cow position:
               
chr16:50677832-50677982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
182-329
               

               
Cow position:
               
chr16:11390875-11391024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
183-321
               

               
Cow position:
               
chr16:7812664-7812801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
183-323
               

               
Cow position:
               
chr16:6310728-6310588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-323
               

               
Cow position:
               
chr16:7723673-7723814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
183-323
               

               
Cow position:
               
chr16:11390313-11390172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
183-323
               

               
Cow position:
               
chr16:30027846-30027986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-323
               

               
Cow position:
               
chr16:49860205-49860348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
183-329
               

               
Cow position:
               
chr16:32893601-32893748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
183-331
               

               
Cow position:
               
chr16:4736611-4736466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
183-331
               

               
Cow position:
               
chr16:12010067-12010216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
183-332
               

               
Cow position:
               
chr16:9578518-9578370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
183-332
               

               
Cow position:
               
chr16:9958803-9958950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
184-323
               

               
Cow position:
               
chr16:44713507-44713367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
184-331
               

               
Cow position:
               
chr16:12097615-12097762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-323
               

               
Cow position:
               
chr16:7496233-7496368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
188-315
               

               
Cow position:
               
chr16:24403450-24403325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
188-323
               

               
Cow position:
               
chr16:29026186-29026318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
188-323
               

               
Cow position:
               
chr16:30174550-30174418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
188-330
               

               
Cow position:
               
chr16:40745381-40745239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
188-331
               

               
Cow position:
               
chr16:18953562-18953706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 124
               

               
Conread position:
               
188-331
               

               
Cow position:
               
chr16:39202118-39202261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
188-332
               

               
Cow position:
               
chr16:50442526-50442669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
190-325
               

               
Cow position:
               
chr16:50286492-50286628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
191-323
               

               
Cow position:
               
chr16:9596351-9596483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
191-323
               

               
Cow position:
               
chr16:13252325-13252197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
191-331
               

               
Cow position:
               
chr16:48448704-48448844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
193-331
               

               
Cow position:
               
chr16:12454804-12454667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
194-331
               

               
Cow position:
               
chr16:15905266-15905129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
194-331
               

               
Cow position:
               
chr16:22824850-22824713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-323
               

               
Cow position:
               
chr16:12220666-12220794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
198-331
               

               
Cow position:
               
chr16:20265574-20265442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
200-338
               

               
Cow position:
               
chr16:31046690-31046551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
201-331
               

               
Cow position:
               
chr16:9836782-9836653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
208-331
               

               
Cow position:
               
chr16:30211452-30211575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
210-329
               

               
Cow position:
               
chr16:3466857-3466975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
212-330
               

               
Cow position:
               
chr16:11653140-11653259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
213-323
               

               
Cow position:
               
chr16:9513297-9513407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
213-330
               

               
Cow position:
               
chr16:17474768-17474884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
216-331
               

               
Cow position:
               
chr16:38355421-38355308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
219-331
               

               
Cow position:
               
chr16:52706067-52705954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               
Show alignments to all cow chromosomes.